Find flights
Deals
When to book
Airlines
FAQs

Cheap flights from the Philippines to Kota Kinabalu from ₱2,743

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 1/16. Fares are subject to change and may not be available on all flights or dates of travel.
MNL — BKI
Dec 29 — Jan 51
1 adult
1 adult, Economy, 0 bags

Find flight deals from Philippines to Kota Kinabalu

Enter your travel dates to find the best prices.

Cheapest flights from Philippines to Kota Kinabalu
Explore the most affordable flight options available from Philippines to Kota Kinabalu. Find the lowest fares from popular airlines and budget airlines, with prices last updated on November 29, 2025.

Sun 12/74:15 pmMNL - BKI
Nonstop2h 15mPhilippines AirAsia
Mon 12/86:55 pmBKI - MNL
Nonstop2h 00mPhilippines AirAsia
Deal found 11/28₱9,220
Thu 12/43:05 amCEB - BKI
1 stop15h 25mMultiple Airlines
Mon 12/810:15 pmBKI - CEB
1 stop14h 45mMultiple Airlines
Deal found 11/26₱12,254
Sun 12/284:15 pmMNL - BKI
Nonstop2h 15mMultiple Airlines
Sat 1/36:00 amBKI - MNL
2 stops18h 35mMultiple Airlines
Deal found 11/29₱14,530
Fri 11/285:45 pmMNL - BKI
1 stop6h 45mCathay Pacific
Sat 11/291:30 amBKI - MNL
1 stop9h 50mCathay Pacific
Deal found 11/27₱19,665
Sat 12/271:10 amMNL - BKI
1 stop8h 25mAirAsia
Sat 1/311:25 pmBKI - MNL
1 stop12h 50mAirAsia
Deal found 11/29₱20,540
Sat 12/277:30 pmMNL - BKI
1 stop23h 30mMultiple Airlines
Tue 12/304:15 pmBKI - MNL
2 stops20h 05mMultiple Airlines
Deal found 11/26₱21,123
Fri 11/284:15 pmMNL - BKI
Nonstop2h 15mPhilippines AirAsia
Sun 11/306:55 pmBKI - MNL
Nonstop2h 00mPhilippines AirAsia
Deal found 11/27₱21,590
Fri 11/288:35 pmMNL - BKI
1 stop27h 55mMultiple Airlines
Sun 11/307:05 pmBKI - MNL
1 stop15h 45mMultiple Airlines
Deal found 11/27₱22,232
Thu 12/43:20 amCEB - BKI
2 stops13h 45mPhilippine Airlines
Mon 12/87:20 amBKI - CEB
2 stops21h 10mPhilippine Airlines
Deal found 11/26₱27,834

Cheap flight deals from Philippines to Kota Kinabalu

Keep the following information in mind while searching for Philippines to Kota Kinabalu flight deals. Data was last updated November 29, 2025.

Round-trip from

₱5,660

One-way from

₱2,743

Popular in

December

Cheapest in

July

Average price

₱6,652

Good round-trip deal

₱5,924 or less

Good one-way deal

₱2,886 or less
Philippines AirAsia
  • Philippines AirAsia
  • 1/16-1/19
  • Nonstop
  • 4h 15m total
  • Philippines to Kota Kinabalu
Search Deals
Philippines AirAsia
  • Philippines AirAsia
  • 1/16
  • Nonstop
  • 2h 15m total
  • Philippines to Kota Kinabalu
Search Deals
Highest demand for flights based on searches. 13% potential increase in price (₱58,983 potential increase over avg. RT price).
Search Deals
Cheapest flight prices on average. 2% potential price decrease (₱8,238 potential savings vs. average RT price).
Search Deals
Average for round-trip flights in November 2025
Search Deals
Price to beat on a round-trip flight from Philippines to Kota Kinabalu.
Search Deals
Price to beat on a one-way flight from Philippines to Kota Kinabalu.
Search Deals

Cheapflights Fare Finder

 
Customize your flight search to find flights from Philippines to Kota Kinabalu that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated November 29, 2025.
Use the filters below to find and compare flights from the Philippines to Kota Kinabalu that are best for you.

Fly from

Philippines

Fly to

Kota Kinabalu

Route

Depart

Return

Price

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Fri 1/16

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Mon 1/19

6:55 pm-8:55 pm

Nonstop2h 00m

₱5,719

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Mon 1/12

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Mon 1/19

6:55 pm-8:55 pm

Nonstop2h 00m

₱6,244

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Wed 1/21

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Fri 1/30

6:55 pm-8:55 pm

Nonstop2h 00m

₱6,769

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Wed 1/21

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Sun 1/25

6:55 pm-8:55 pm

Nonstop2h 00m

₱6,769

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Tue 1/13

12:55 pm-11:00 pm

1 stop10h 05m

Kota Kinabalu

Tue 1/20

11:40 am-9:25 pm

1 stop9h 45m

₱9,220

Davao CityKota Kinabalu

DVO - BKI

DVOBKI

Davao City Francisco Bangoy

Mon 2/9

5:15 am-6:30 pm

1 stop13h 15m

Kota Kinabalu

Wed 2/25

6:55 pm-7:10 am

1 stop12h 15m

₱10,387

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Mon 1/26

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Sat 1/31

1:05 pm-11:55 pm

2 stops10h 50m

₱10,445

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Fri 1/16

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Mon 1/19

6:00 am-5:45 pm

2 stops11h 45m

₱10,737

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Sun 1/11

7:50 am-6:30 pm

1 stop10h 40m

Kota Kinabalu

Sun 1/18

6:00 am-9:25 pm

2 stops15h 25m

₱10,912

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Sat 1/10

3:05 am-6:30 pm

1 stop15h 25m

Kota Kinabalu

Sun 1/18

6:55 pm-5:35 am

1 stop10h 40m

₱11,029

Flights are sorted by cheapest round-trip flights first.

Deals found on 11/27

Showing 1-10 of 49 results
1
2
3
...
5

Best time to book a flight from Philippines to Kota Kinabalu

Have a flexible travel schedule? Discover the best time to fly to Kota Kinabalu from Philippines with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from the Philippines to Kota Kinabalu

What is the cheapest month to book a flight from Philippines to Kota Kinabalu?

Currently, September is the cheapest month in which you can book a flight from Philippines to Kota Kinabalu (average of ₱4,026). Flying from Philippines to Kota Kinabalu in January is currently the most expensive (average of ₱5,660). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from PH to BKI?

Find hourly flight availability from Philippines to Kota Kinabalu. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated November 29, 2025.

It’s optimal to fly from Philippines to Kota Kinabalu at noon. By choosing this option you can save up to 22% on the cost of your flight, compared to a flight in the evening.

How often are flights from the Philippines to Kota Kinabalu delayed?

About 28% of weekly flights between Philippines and Kota Kinabalu have experienced delays in the past year, with the average delay time being 152 minutes.

What is the most punctual flight time for the Philippines to Kota Kinabalu flights?

Historically, flights departing at night are less likely to be delayed, whereas flights leaving in the early afternoon tend to experience delays more often.

What day of the week experiences the fewest flight delays on this route?

Tuesday tends to have the lowest number of delays on this route, whereas Wednesday has historically faced a higher average of delays compared to other days of the week.

Which airline has the best punctuality record on the Philippines to Kota Kinabalu flights?

Over the last year, Philippines AirAsia have had the lowest number of delays on this route, with no flights being classified as delayed.

Reviews of airlines servicing Kota Kinabalu

Get insights into the airlines that provide service to Kota Kinabalu. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Kota Kinabalu. Reviews last updated November 29, 2025.
Get a feel of what it's like to fly with Scoot and Philippines AirAsia from the Philippines to Kota Kinabalu by reading reviews from past customers. Users have also rated airlines in terms of entertainment options, comfort, food, crew/service, and boarding process.
Scoot
6.7
Okay
311 reviews
Check prices

Overall

6.7

Food

5.8

Boarding

6.9

Crew

7.4

Comfort

6.6

Entertainment

5.2

Reviews

1 / 17
10.0
Excellent

Gary,Oct 2025

CEB - SIN

We didn’t have food or entertainment but the flight was very good .will fly with them again.
Scoot
6.7
Okay
311 reviews
Scoot
6.7
Okay
311 reviews
Check prices

Overall

6.7

Food

5.8

Boarding

6.9

Crew

7.4

Comfort

6.6

Entertainment

5.2

Reviews

1 / 17
10.0
Excellent

Gary,Oct 2025

CEB - SIN

We didn’t have food or entertainment but the flight was very good .will fly with them again.
Philippines AirAsia
6.6
Okay
117 reviews
Scoot
6.7
Okay
311 reviews
Check prices

Overall

6.7

Food

5.8

Boarding

6.9

Crew

7.4

Comfort

6.6

Entertainment

5.2

Reviews

1 / 17
10.0
Excellent

Gary,Oct 2025

CEB - SIN

We didn’t have food or entertainment but the flight was very good .will fly with them again.

Related info for your journey

Find useful and relevant information for your journey from Philippines to Kota Kinabalu. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly into for flights to Kota Kinabalu from Philippines?

    Kota Kinabalu (BKI) is the airport you will fly into if you book a flight from Philippines to Kota Kinabalu. It is only a 5.8 km journey from Kota Kinabalu (BKI) to Kota Kinabalu’s city center.

  • How popular is this Philippines to Kota Kinabalu flight route?

    The Philippines to Kota Kinabalu flight path was viewed by 1,222 users in the past month. Keep an eye out for changes in search interest prior to high and low season.

  • How long is the flight from Philippines to Kota Kinabalu?

    There are many flights that can get you from Philippines to Kota Kinabalu in 2h 15m. Fly via Philippines AirAsia to get the fastest option. The distance between Philippines and Kota Kinabalu is about 1096 km. Generally, flights for this route are direct.

  • What are the most popular routes from Philippines to Kota Kinabalu?

    The most popular flight routes from Philippines to Kota Kinabalu are Manila Ninoy Aquino Intl - Kota Kinabalu, Cebu City Mactan Intl - Kota Kinabalu and Davao City Francisco Bangoy - Kota Kinabalu.

  • What are the cheapest flights from Philippines to Kota Kinabalu?

    On average you can expect to pay ₱4,926 for a flight from Philippines to Kota Kinabalu. The cheapest flight overall is ₱2,877 while the most popular route, (Manila Ninoy Aquino Intl - Kota Kinabalu) is currently priced at ₱5,660.

  • Can I find deals for flights from Philippines to Kota Kinabalu that include hotel bookings?

    Yes. In addition to deals on Philippines to Kota Kinabalu flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Philippines to Kota Kinabalu?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Philippines to Kota Kinabalu.

  • Can I find deals for business class flights from Philippines to Kota Kinabalu?

    Yes. Cheapflights offers flight deals from Philippines to Kota Kinabalu by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Philippines to Kota Kinabalu?

    Currently, September is the cheapest month in which you can book a flight from Philippines to Kota Kinabalu (average of ₱4,026). Flying from Philippines to Kota Kinabalu in January is currently the most expensive (average of ₱5,660). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

Toggle through the tabs below to find thousands of options on Cheapflights for your next trip.

Alternative routes for Philippines to Kota Kinabalu

See prices for flight routes from nearby airports that may be better suited for you.
Manila to Kota Kinabalu flights
Davao City to Kota Kinabalu flights
Zamboanga City to Kota Kinabalu flights

Top 2 airlines flying from Philippines to Kota Kinabalu

Discover the top 2 airlines that operate flights from Philippines to Kota Kinabalu. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated November 29, 2025.
AirlineCheapestAverageFlexibilityOn-time
Philippines AirAsiaCheapest₱4,359Average₱9,334FlexibilityNo cancel feeOn-time53%
Search Philippines AirAsia flights
ScootCheapest₱8,487Average₱10,758FlexibilityNo cancel feeOn-timeN/A
Search Scoot flights

Fly with Cheapflights

Find the best flight deals on Cheapflights, where travelers can enjoy low prices and a wide availability of flights to their desired destinations.

How does Cheapflights help users find flights from Philippines to Kota Kinabalu?

Deals for Philippines to Kota Kinabalu flights are sourced from 900+ travel sites when you use Cheapflights. When all flight results come back, Cheapflights lets you sort and filter flights using different criteria to choose better, like price, airport, cabin class, and plenty of other options.

Why should you use Cheapflights to find cheap flight tickets from Philippines to Kota Kinabalu?

Cheapflights taps into our reliable network of hundreds of airlines and travel agencies to find the best deals for flights from Philippines to Kota Kinabalu for you. Better yet — we are completely free to use.

Can Cheapflights find flights from Philippines to Kota Kinabalu with no change fees?

Yes! Cheapflights helps users easily find flights from Philippines to Kota Kinabalu with no change fees.

Can Cheapflights notify me if prices for flights from Philippines to Kota Kinabalu become cheaper?

Of course! You can now track prices for flights from Philippines to Kota Kinabalu and get an alert from Cheapflights when they change. Have a valid email address ready and click the bell icon next to the flight deals above to set up your price alerts.

100% Free

Cheapflights is completely free to use, so you can start saving the moment you arrive.

Book with Flexibility

Our users can plan ahead with confidence and find flights with no change fees

Travel Smart

Millions of people come to us for their flight needs every year. We help make travel planning easy by providing useful insights and data-driven graphs that can inform your decisions.