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Cheap flights from the Philippines to Kota Kinabalu from ₱2,993

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 11/28. Fares are subject to change and may not be available on all flights or dates of travel.
MNL — BKI
Dec 4 — Dec 111
1 adult
1 adult, Economy, 0 bags

Find flight deals from Philippines to Kota Kinabalu

Enter your travel dates to find the best prices.

Cheapest flights from Philippines to Kota Kinabalu
Explore the most affordable flight options available from Philippines to Kota Kinabalu. Find the lowest fares from popular airlines and budget airlines, with prices last updated on November 4, 2025.

Fri 11/214:15 pmMNL - BKI
Nonstop2h 15mPhilippines AirAsia
Wed 11/266:55 pmBKI - MNL
Nonstop2h 00mPhilippines AirAsia
Deal found 11/3₱5,987
Fri 11/284:15 pmMNL - BKI
Nonstop2h 15mPhilippines AirAsia
Fri 12/56:55 pmBKI - MNL
Nonstop2h 00mPhilippines AirAsia
Deal found 11/4₱6,339
Wed 11/264:15 pmMNL - BKI
Nonstop2h 15mPhilippines AirAsia
Sun 11/306:55 pmBKI - MNL
Nonstop2h 00mPhilippines AirAsia
Deal found 11/1₱6,691
Wed 11/54:15 pmMNL - BKI
Nonstop2h 15mPhilippines AirAsia
Fri 11/146:55 pmBKI - MNL
Nonstop2h 00mPhilippines AirAsia
Deal found 11/2₱6,984
Fri 12/54:15 pmMNL - BKI
Nonstop2h 15mPhilippines AirAsia
Fri 12/126:55 pmBKI - MNL
Nonstop2h 00mPhilippines AirAsia
Deal found 11/4₱7,689
Sun 12/74:15 pmMNL - BKI
Nonstop2h 15mPhilippines AirAsia
Sun 12/146:55 pmBKI - MNL
Nonstop2h 00mPhilippines AirAsia
Deal found 11/4₱8,276
Wed 12/174:15 pmMNL - BKI
Nonstop2h 15mPhilippines AirAsia
Wed 12/246:55 pmBKI - MNL
Nonstop2h 00mPhilippines AirAsia
Deal found 11/1₱8,628
Fri 11/216:50 amMNL - BKI
1 stop10h 10mMultiple Airlines
Sun 11/236:55 pmBKI - MNL
Nonstop2h 00mMultiple Airlines
Deal found 11/2₱10,212
Fri 11/284:15 pmMNL - BKI
Nonstop2h 15mMultiple Airlines
Thu 12/41:30 amBKI - MNL
1 stop23h 50mMultiple Airlines
Deal found 11/4₱10,564
Fri 11/284:15 pmMNL - BKI
Nonstop2h 15mMultiple Airlines
Wed 12/31:30 amBKI - MNL
1 stop18h 10mMultiple Airlines
Deal found 11/4₱10,741
Wed 11/128:00 amCEB - BKI
1 stop10h 30mMultiple Airlines
Thu 11/131:30 pmBKI - CEB
2 stops11h 05mMultiple Airlines
Deal found 11/2₱14,908
Tue 12/162:05 amDVO - BKI
1 stop16h 25mMultiple Airlines
Wed 12/246:55 pmBKI - DVO
2 stops17h 00mMultiple Airlines
Deal found 11/2₱17,079

Cheap flight deals from Philippines to Kota Kinabalu

Keep the following information in mind while searching for Philippines to Kota Kinabalu flight deals. Data was last updated November 4, 2025.

Round-trip from

₱5,869

One-way from

₱2,993

Popular in

January

Cheapest in

July

Average price

₱6,339

Good round-trip deal

₱6,402 or less

Good one-way deal

₱3,428 or less
Philippines AirAsia
  • Philippines AirAsia
  • 1/16-1/21
  • Nonstop
  • 4h 15m total
  • Philippines to Kota Kinabalu
Search Deals
Philippines AirAsia
  • Philippines AirAsia
  • 11/28
  • Nonstop
  • 2h 15m total
  • Philippines to Kota Kinabalu
Search Deals
Highest demand for flights based on searches. 16% potential increase in price (₱74,865 potential increase over avg. RT price).
Search Deals
Cheapest flight prices on average. 1% potential price decrease (₱7,479 potential savings vs. average RT price).
Search Deals
Average for round-trip flights in November 2025
Search Deals
Price to beat on a round-trip flight from Philippines to Kota Kinabalu.
Search Deals
Price to beat on a one-way flight from Philippines to Kota Kinabalu.
Search Deals

Cheapflights Fare Finder

 
Customize your flight search to find flights from Philippines to Kota Kinabalu that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated November 4, 2025.
Use the filters below to find and compare flights from the Philippines to Kota Kinabalu that are best for you.

Fly from

Philippines

Fly to

Kota Kinabalu

Route

Depart

Return

Price

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Wed 1/21

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Fri 1/30

6:55 pm-8:55 pm

Nonstop2h 00m

₱6,163

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Wed 11/26

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Sun 11/30

6:55 pm-8:55 pm

Nonstop2h 00m

₱7,219

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Wed 12/17

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Wed 12/24

6:55 pm-8:55 pm

Nonstop2h 00m

₱8,628

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Thu 1/15

3:05 am-6:30 pm

1 stop15h 25m

Kota Kinabalu

Mon 1/19

11:25 pm-12:05 pm

1 stop12h 40m

₱10,154

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Fri 11/21

6:50 am-5:00 pm

1 stop10h 10m

Kota Kinabalu

Sun 11/23

6:55 pm-8:55 pm

Nonstop2h 00m

₱10,212

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Thu 1/22

2:40 am-6:30 pm

1 stop15h 50m

Kota Kinabalu

Sun 1/25

11:40 am-9:25 pm

1 stop9h 45m

₱10,682

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Fri 1/16

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Tue 1/20

3:55 pm-12:35 am

1 stop8h 40m

₱11,210

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Fri 11/21

9:30 pm-8:40 am

1 stop11h 10m

Kota Kinabalu

Wed 11/26

6:55 pm-8:55 pm

Nonstop2h 00m

₱11,386

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Fri 12/5

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Fri 12/12

1:05 pm-11:55 pm

2 stops10h 50m

₱11,680

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Fri 11/28

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Thu 12/4

6:00 am-1:10 am

2 stops19h 10m

₱12,384

Flights are sorted by cheapest round-trip flights first.

Deals found on 11/4

Showing 1-10 of 30 results
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Best time to book a flight from Philippines to Kota Kinabalu

Have a flexible travel schedule? Discover the best time to fly to Kota Kinabalu from Philippines with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from the Philippines to Kota Kinabalu

What is the cheapest month to book a flight from Philippines to Kota Kinabalu?

Currently, September is the cheapest month in which you can book a flight from Philippines to Kota Kinabalu (average of ₱4,050). Flying from Philippines to Kota Kinabalu in March is currently the most expensive (average of ₱5,517). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from PH to BKI?

Find hourly flight availability from Philippines to Kota Kinabalu. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated November 4, 2025.

It’s optimal to fly from Philippines to Kota Kinabalu in the afternoon. By choosing this option you can save up to 20% on the cost of your flight, compared to a flight in the evening.

Reviews of airlines servicing Kota Kinabalu

Get insights into the airlines that provide service to Kota Kinabalu. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Kota Kinabalu. Reviews last updated November 4, 2025.
Get a feel of what it's like to fly with Scoot and Philippines AirAsia from the Philippines to Kota Kinabalu by reading reviews from past customers. Users have also rated airlines in terms of entertainment options, comfort, food, crew/service, and boarding process.
Scoot
6.7
Okay
309 reviews
Check prices

Boarding

6.8

Comfort

6.6

Food

5.7

Overall

6.7

Crew

7.4

Entertainment

5.2

Reviews

1 / 17
10.0
Excellent

Gary,Oct 2025

CEB - SIN

We didn’t have food or entertainment but the flight was very good .will fly with them again.
Scoot
6.7
Okay
309 reviews
Scoot
6.7
Okay
309 reviews
Check prices

Boarding

6.8

Comfort

6.6

Food

5.7

Overall

6.7

Crew

7.4

Entertainment

5.2

Reviews

1 / 17
10.0
Excellent

Gary,Oct 2025

CEB - SIN

We didn’t have food or entertainment but the flight was very good .will fly with them again.
Philippines AirAsia
6.6
Okay
114 reviews
Scoot
6.7
Okay
309 reviews
Check prices

Boarding

6.8

Comfort

6.6

Food

5.7

Overall

6.7

Crew

7.4

Entertainment

5.2

Reviews

1 / 17
10.0
Excellent

Gary,Oct 2025

CEB - SIN

We didn’t have food or entertainment but the flight was very good .will fly with them again.

Related info for your journey

Find useful and relevant information for your journey from Philippines to Kota Kinabalu. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly into for flights to Kota Kinabalu from Philippines?

    Kota Kinabalu (BKI) is the airport you will fly into if you book a flight from Philippines to Kota Kinabalu. It is only a 5.8 km journey from Kota Kinabalu (BKI) to Kota Kinabalu’s city center.

  • How popular is this Philippines to Kota Kinabalu flight route?

    The Philippines to Kota Kinabalu flight path was viewed by 1,301 users in the past month. Keep an eye out for changes in search interest prior to high and low season.

  • How long is the flight from Philippines to Kota Kinabalu?

    There are many flights that can get you from Philippines to Kota Kinabalu in 2h 15m. Fly via Philippines AirAsia to get the fastest option. The distance between Philippines and Kota Kinabalu is about 1096 km. Generally, flights for this route are direct.

  • What are the most popular routes from Philippines to Kota Kinabalu?

    The most popular flight routes from Philippines to Kota Kinabalu are Manila Ninoy Aquino Intl - Kota Kinabalu, Cebu City Mactan Intl - Kota Kinabalu and Davao City Francisco Bangoy - Kota Kinabalu.

  • What are the cheapest flights from Philippines to Kota Kinabalu?

    On average you can expect to pay ₱5,111 for a flight from Philippines to Kota Kinabalu. The cheapest flight overall is ₱3,099 while the most popular route, (Manila Ninoy Aquino Intl - Kota Kinabalu) is currently priced at ₱5,987.

  • Can I find deals for flights from Philippines to Kota Kinabalu that include hotel bookings?

    Yes. In addition to deals on Philippines to Kota Kinabalu flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Philippines to Kota Kinabalu?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Philippines to Kota Kinabalu.

  • Can I find deals for business class flights from Philippines to Kota Kinabalu?

    Yes. Cheapflights offers flight deals from Philippines to Kota Kinabalu by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Philippines to Kota Kinabalu?

    Currently, September is the cheapest month in which you can book a flight from Philippines to Kota Kinabalu (average of ₱4,050). Flying from Philippines to Kota Kinabalu in March is currently the most expensive (average of ₱5,517). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

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Alternative routes for Philippines to Kota Kinabalu

See prices for flight routes from nearby airports that may be better suited for you.
Manila to Kota Kinabalu flights
Davao City to Kota Kinabalu flights
Zamboanga City to Kota Kinabalu flights

Top 2 airlines flying from Philippines to Kota Kinabalu

Discover the top 2 airlines that operate flights from Philippines to Kota Kinabalu. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated November 4, 2025.
AirlineCheapestAverageFlexibilityOn-time
Philippines AirAsiaCheapest₱4,397Average₱9,362FlexibilityNo cancel feeOn-time53%
Search Philippines AirAsia flights
ScootCheapest₱8,536Average₱10,820FlexibilityNo cancel feeOn-timeN/A
Search Scoot flights

Fly with Cheapflights

Find the best flight deals on Cheapflights, where travelers can enjoy low prices and a wide availability of flights to their desired destinations.

How does Cheapflights help users find flights from Philippines to Kota Kinabalu?

Deals for Philippines to Kota Kinabalu flights are sourced from 900+ travel sites when you use Cheapflights. When all flight results come back, Cheapflights lets you sort and filter flights using different criteria to choose better, like price, airport, cabin class, and plenty of other options.

Why should you use Cheapflights to find cheap flight tickets from Philippines to Kota Kinabalu?

Cheapflights taps into our reliable network of hundreds of airlines and travel agencies to find the best deals for flights from Philippines to Kota Kinabalu for you. Better yet — we are completely free to use.

Can Cheapflights find flights from Philippines to Kota Kinabalu with no change fees?

Yes! Cheapflights helps users easily find flights from Philippines to Kota Kinabalu with no change fees.

Can Cheapflights notify me if prices for flights from Philippines to Kota Kinabalu become cheaper?

Of course! You can now track prices for flights from Philippines to Kota Kinabalu and get an alert from Cheapflights when they change. Have a valid email address ready and click the bell icon next to the flight deals above to set up your price alerts.

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