How long is the flight from Cebu to Kota Kinabalu?

For as low as ₱14,773, Philippines AirAsia can have you in Kota Kinabalu from Cebu in 11h 55m. There are 999 km between Cebu and Kota Kinabalu.

In terms of precipitation, rainfall in Kota Kinabalu ranges from 60.0 - 351.0 inches per month. October is typically the wettest month, when rainfall can reach 351.0 mm. February is typically the driest time to visit Kota Kinabalu when rainfall is around 60.0 mm.

If weather is an important factor for your trip to Kota Kinabalu, use this chart to help with planning. For those seeking warmer temperatures, April is the ideal time of year to visit, when temperatures reach an average of 27.0 C. Travelers looking to avoid the cold should look outside of January, when temperatures are typically at their lowest (around 26.0 C).

What is the cheapest time of day to fly from CEB to BKI?

When flying from Cebu to Kota Kinabalu, the time of day you decide to fly out makes little to no difference towards the overall price you’ll pay on tickets.

What airport do you fly into for flights to Kota Kinabalu from Cebu?

Most people fly into Kota Kinabalu (BKI) if they book a flight to Kota Kinabalu from Cebu. Kota Kinabalu is conveniently located just 5.8 km from Kota Kinabalu’s city center.

Can I find deals for flights from Cebu to Kota Kinabalu that include hotel bookings?

Yes. In addition to deals on Cebu to Kota Kinabalu flights, Cheapflights offers vacation packages that include both flights and hotel.

How can I find direct flights from Cebu to Kota Kinabalu?

After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Cebu to Kota Kinabalu.

Can I find deals for business class flights from Cebu to Kota Kinabalu?

Yes. Cheapflights offers flight deals from Cebu to Kota Kinabalu by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

₱7,418+ Cheap Flights from Cebu to Kota Kinabalu

Cheap flight deals from Cebu to Kota Kinabalu

Enter your travel dates to find the best prices.

Cheapest

Best

Last-minute

One-way

Cheapest flights from Cebu to Kota Kinabalu
Explore the most affordable flight options available from Cebu to Kota Kinabalu. Find the lowest fares from popular airlines and budget airlines, with prices last updated on October 19, 2026.

Mon 11/26:25 am -

1 stop11h 55m

Mon 11/97:05 pm -

1 stop10h 50m

Deal found 10/19₱14,711

Fri 11/66:25 am -

1 stop11h 55m

Sun 11/87:05 pm -

1 stop15h 00m

Deal found 10/18₱14,773

Fri 11/136:25 am -

1 stop11h 55m

Sun 11/157:05 pm -

1 stop10h 50m

Deal found 10/15₱15,151

Mon 11/166:25 am -

1 stop11h 55m

Mon 11/237:05 pm -

1 stop16h 35m

Deal found 10/19₱17,037

Sun 11/296:25 am -

1 stop11h 55m

Sun 12/67:05 pm -

1 stop24h 35m

Deal found 10/15₱17,665

Mon 12/2110:35 am -

1 stop7h 45m

Fri 12/257:05 pm -

1 stop10h 50m

Deal found 10/16₱18,734

Mon 11/28:05 pm -

2 stops12h 45m

Mon 11/97:05 pm -

1 stop5h 45m

Deal found 10/19₱22,003

Fri 11/68:05 pm -

2 stops12h 45m

Sun 11/87:05 pm -

1 stop5h 45m

Deal found 10/18₱23,449

Sat 11/284:45 am -

1 stop13h 35m

Sat 12/51:30 am -

2 stops21h 55m

Deal found 10/15₱23,763

Find flight deals from Cebu to Kota Kinabalu

Round-trip from	₱14,773
One-way from	₱7,418

Philippines AirAsia
11/6-11/8
2 total stops
26h 55m total
Cebu to Kota Kinabalu

Search Deals

Philippines AirAsia
2/28-12/31
1 total stop
11h 55m total
Cebu to Kota Kinabalu

Search Deals

Fly from

Fly to

Route

Depart

Return

Price

Cheapest round-trip

Cebu CityKota Kinabalu

CEB Cebu City Mactan Intl - BKI Kota Kinabalu

CEBBKI

Cebu City Mactan Intl

Sun 2/28

6:25 am-6:20 pm

1 stop11h 55m

Kota Kinabalu

Wed 12/31

12:00 am-12:00 am

Nonstop0h 00m

₱7,418

Cebu CityKota Kinabalu

CEB Cebu City Mactan Intl - BKI Kota Kinabalu

CEBBKI

Cebu City Mactan Intl

Sun 11/29

6:30 am-6:20 pm

1 stop11h 50m

Kota Kinabalu

Wed 12/31

12:00 am-12:00 am

Nonstop0h 00m

₱7,795

Quickest round-trip

Cebu CityKota Kinabalu

CEB Cebu City Mactan Intl - BKI Kota Kinabalu

CEBBKI

Cebu City Mactan Intl

Mon 11/23

10:35 am-6:20 pm

1 stop7h 45m

Kota Kinabalu

Wed 12/31

12:00 am-12:00 am

Nonstop0h 00m

₱7,795

Cebu CityKota Kinabalu

CEB Cebu City Mactan Intl - BKI Kota Kinabalu

CEBBKI

Cebu City Mactan Intl

Tue 11/24

2:15 am-6:20 pm

1 stop16h 05m

Kota Kinabalu

Wed 12/31

12:00 am-12:00 am

Nonstop0h 00m

₱7,795

Cebu CityKota Kinabalu

CEB Cebu City Mactan Intl - BKI Kota Kinabalu

CEBBKI

Cebu City Mactan Intl

Wed 1/6

9:15 am-6:20 pm

1 stop9h 05m

Kota Kinabalu

Wed 12/31

12:00 am-12:00 am

Nonstop0h 00m

₱8,047

Cebu CityKota Kinabalu

CEB Cebu City Mactan Intl - BKI Kota Kinabalu

CEBBKI

Cebu City Mactan Intl

Tue 12/1

10:30 pm-6:20 pm

1 stop19h 50m

Kota Kinabalu

Wed 12/31

12:00 am-12:00 am

Nonstop0h 00m

₱8,235

Cebu CityKota Kinabalu

CEB Cebu City Mactan Intl - BKI Kota Kinabalu

CEBBKI

Cebu City Mactan Intl

Sun 2/28

8:05 pm-9:30 am

2 stops13h 25m

Kota Kinabalu

Wed 12/31

12:00 am-12:00 am

Nonstop0h 00m

₱11,504

Cebu CityKota Kinabalu

CEB Cebu City Mactan Intl - BKI Kota Kinabalu

CEBBKI

Cebu City Mactan Intl

Sat 1/2

10:20 pm-6:20 pm

1 stop20h 00m

Kota Kinabalu

Wed 12/31

12:00 am-12:00 am

Nonstop0h 00m

₱12,762

Cebu CityKota Kinabalu

CEB Cebu City Mactan Intl - BKI Kota Kinabalu

CEBBKI

Cebu City Mactan Intl

Mon 11/16

6:25 am-6:20 pm

1 stop11h 55m

Kota Kinabalu

Mon 11/23

7:05 pm-5:55 am

1 stop10h 50m

₱14,773

Cebu CityKota Kinabalu

CEB Cebu City Mactan Intl - BKI Kota Kinabalu

CEBBKI

Cebu City Mactan Intl

Fri 11/13

6:25 am-6:20 pm

1 stop11h 55m

Kota Kinabalu

Sun 11/15

7:05 pm-5:55 am

1 stop10h 50m

₱15,151

Flights are sorted by cheapest round-trip flights first.

Deals found on 10/19

Showing 1-10 of 17 resultsSorted by cheapest first

Best time to book a flight from Cebu to Kota Kinabalu

Have a flexible travel schedule? Discover the best time to fly to Kota Kinabalu from Cebu with our price prediction graph.

CEB-BKI

Estimated round-trip price

Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Cebu to Kota Kinabalu

PHCEB-BKI

CEB-BKI

No data available for this route at this time. Please check back soon.

Related info for your journey

What airport do you fly into for flights to Kota Kinabalu from Cebu?
Most people fly into Kota Kinabalu (BKI) if they book a flight to Kota Kinabalu from Cebu. Kota Kinabalu is conveniently located just 5.8 km from Kota Kinabalu’s city center.
How long is the flight from Cebu to Kota Kinabalu?
For as low as ₱14,773, Philippines AirAsia can have you in Kota Kinabalu from Cebu in 11h 55m. There are 999 km between Cebu and Kota Kinabalu.
Can I find deals for flights from Cebu to Kota Kinabalu that include hotel bookings?
Yes. In addition to deals on Cebu to Kota Kinabalu flights, Cheapflights offers vacation packages that include both flights and hotel.
How can I find direct flights from Cebu to Kota Kinabalu?
After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Cebu to Kota Kinabalu.
Can I find deals for business class flights from Cebu to Kota Kinabalu?
Yes. Cheapflights offers flight deals from Cebu to Kota Kinabalu by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

Alternative routes

Complete your trip

Direct flights to Sabah

Flights by cabin class

Kota Kinabalu flight routes

Other flight options

Popular flights

Alternative routes for Cebu to Kota Kinabalu

Manila to Kota Kinabalu flights

Davao City to Kota Kinabalu flights

Zamboanga City to Kota Kinabalu flights

Fly with Cheapflights

How does Cheapflights help users find flights from Cebu to Kota Kinabalu?

Cheapflights goes through 900+ travel sites to look for the best flight deals for flights from Cebu to Kota Kinabalu. Too many options? Cheapflights also provides filters for things like airlines, price ranges, and number of stops to help you make a decision easily.

Why should you use Cheapflights to find cheap flight tickets from Cebu to Kota Kinabalu?

Cheapflights simply makes it quick and affordable to book flights from Cebu to Kota Kinabalu by bringing together all flight options from hundreds of airlines and agencies online — and put it in one place for you to choose from. Plus, Cheapflights is 100% free to use for all.

Can Cheapflights find flights from Cebu to Kota Kinabalu with no change fees?

Need flexible booking options for your flight to Kota Kinabalu from Cebu? Don’t worry, Cheapflights have you covered. Use our search filter to only show flights with no change fees.

Can Cheapflights notify me if prices for flights from Cebu to Kota Kinabalu become cheaper?

Of course! You can now track prices for flights from Cebu to Kota Kinabalu and get an alert from Cheapflights when they change. Have a valid email address ready and click the bell icon next to the flight deals above to set up your price alerts.

100% Free

Cheapflights is completely free to use, so you can start saving the moment you arrive.

Book with Flexibility

Our users can plan ahead with confidence and find flights with no change fees

Travel Smart

Millions of people come to us for their flight needs every year. We help make travel planning easy by providing useful insights and data-driven graphs that can inform your decisions.

Cheap flights from Cebu to Kota Kinabalu from ₱7,418

This is the cheapest round-trip flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 2/28. Fares are subject to change and may not be available on all flights or dates of travel.

Cheap flight deals from Cebu to Kota Kinabalu

Cheapest flights from Cebu to Kota KinabaluExplore the most affordable flight options available from Cebu to Kota Kinabalu. Find the lowest fares from popular airlines and budget airlines, with prices last updated on October 19, 2026.

Explore the most affordable flight options available from Cebu to Kota Kinabalu. Find the lowest fares from popular airlines and budget airlines, with prices last updated on October 19, 2026.

Best flights from Cebu to Kota KinabaluDiscover carefully curated flight deals from Cebu to Kota Kinabalu that have cost, travel time, and layovers in mind to ensure you get the best travel experience. Data last updated October 19, 2026.

Discover carefully curated flight deals from Cebu to Kota Kinabalu that have cost, travel time, and layovers in mind to ensure you get the best travel experience. Data last updated October 19, 2026.

Last-minute flights from Cebu to Kota KinabaluDiscover last-minute flight deals from Cebu to Kota Kinabalu. Data last updated October 19, 2026 and is based on user searches.

Discover last-minute flight deals from Cebu to Kota Kinabalu. Data last updated October 19, 2026 and is based on user searches.

One-way flights from Cebu to Kota KinabaluSearch for one-way flight options from Cebu to Kota Kinabalu. Find affordable one-way fares based on user searches. Data last updated October 19, 2026.

Search for one-way flight options from Cebu to Kota Kinabalu. Find affordable one-way fares based on user searches. Data last updated October 19, 2026.

Find flight deals from Cebu to Kota Kinabalu

Round-trip from

One-way from

Cheapflights Fare Finder

Use the filters below to find and compare flights from Cebu to Kota Kinabalu that are best for you.

Best time to book a flight from Cebu to Kota Kinabalu

Have a flexible travel schedule? Discover the best time to fly to Kota Kinabalu from Cebu with our price prediction graph.

Cheapflights Insights

Related info for your journey

What airport do you fly into for flights to Kota Kinabalu from Cebu?

How long is the flight from Cebu to Kota Kinabalu?

Can I find deals for flights from Cebu to Kota Kinabalu that include hotel bookings?

How can I find direct flights from Cebu to Kota Kinabalu?

Can I find deals for business class flights from Cebu to Kota Kinabalu?

Browse thousands of different options on Cheapflights for your next trip

Toggle through the tabs below to find thousands of options on Cheapflights for your next trip.

Alternative routes for Cebu to Kota Kinabalu

See prices for flight routes from nearby airports that may be better suited for you.

Complete your trip

Complete your trip to Kota Kinabalu by adding a car rental and/or hotel reservation to your travel itinerary.

Direct flights to Sabah

Book a non-stop flight to one of these other cities located in Sabah.

Search flights from Cebu to Kota Kinabalu by cabin class

Find flights from Cebu to Kota Kinabalu, based on your preferred cabin class, be it economy, premium economy, business, or first class.

Other flights to Kota Kinabalu

Explore flights to Kota Kinabalu departing from other origins. Flights are based on user searches made on Cheapflights and were last updated on October 19, 2026.

Cebu and Kota Kinabalu flights

Browse other Cebu and Kota Kinabalu flight options. Last updated on October 19, 2026.

Popular flight searches

Check out other popular destinations found by fellow travelers in 2026

Fly with Cheapflights

How does Cheapflights help users find flights from Cebu to Kota Kinabalu?

Why should you use Cheapflights to find cheap flight tickets from Cebu to Kota Kinabalu?

Can Cheapflights find flights from Cebu to Kota Kinabalu with no change fees?

Can Cheapflights notify me if prices for flights from Cebu to Kota Kinabalu become cheaper?

100% Free

Book with Flexibility

Travel Smart

Cheapest flights from Cebu to Kota Kinabalu
Explore the most affordable flight options available from Cebu to Kota Kinabalu. Find the lowest fares from popular airlines and budget airlines, with prices last updated on October 19, 2026.

Best flights from Cebu to Kota Kinabalu
Discover carefully curated flight deals from Cebu to Kota Kinabalu that have cost, travel time, and layovers in mind to ensure you get the best travel experience. Data last updated October 19, 2026.

Last-minute flights from Cebu to Kota Kinabalu
Discover last-minute flight deals from Cebu to Kota Kinabalu. Data last updated October 19, 2026 and is based on user searches.

One-way flights from Cebu to Kota Kinabalu
Search for one-way flight options from Cebu to Kota Kinabalu. Find affordable one-way fares based on user searches. Data last updated October 19, 2026.