In terms of precipitation, rainfall in Kota Kinabalu ranges from 60.0 - 351.0 inches per month. October is typically the wettest month, when rainfall can reach 351.0 mm. February is typically the driest time to visit Kota Kinabalu when rainfall is around 60.0 mm. Find deals

If weather is an important factor for your trip to Kota Kinabalu, use this chart to help with planning. For those seeking warmer temperatures, April is the ideal time of year to visit, when temperatures reach an average of 27.0 C. Travelers looking to avoid the cold should look outside of January, when temperatures are typically at their lowest (around 26.0 C). Find deals

What is the cheapest month to fly from Cebu to Kota Kinabalu?

Our data shows that October tends to be the cheapest month to fly to Kota Kinabalu from Cebu. Users have commonly found prices around ₱12,761 for the month, but tickets can be as low as ₱8,660. Due to multiple factors, prepare for potentially higher prices in March. Find deals

What airport do you fly into for flights to Kota Kinabalu from Cebu?

Most people fly into Kota Kinabalu (BKI) if they book a flight to Kota Kinabalu from Cebu. Kota Kinabalu is conveniently located just 5.8 km from Kota Kinabalu’s city center.

Can I find deals for flights from Cebu to Kota Kinabalu that include hotel bookings?

Yes. In addition to deals on Cebu to Kota Kinabalu flights, Cheapflights offers vacation packages that include both flights and hotel.

How can I find direct flights from Cebu to Kota Kinabalu?

After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Cebu to Kota Kinabalu.

Can I find deals for business class flights from Cebu to Kota Kinabalu?

Yes. Cheapflights offers flight deals from Cebu to Kota Kinabalu by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

₱3,824+ Flights from Cebu to Kota Kinabalu

Cheap flight deals from Cebu to Kota Kinabalu

Round-trip from	₱6,917
One-way from	₱3,824
Popular in	March
Cheapest in	October
Average price	₱11,529

Philippines AirAsia
9/2-9/17
2 total stops
46h 50m total
Cebu to Kota Kinabalu

Search Deals

Philippines AirAsia
10/5
1 total stop
17h 30m total
Cebu to Kota Kinabalu

Search Deals

Highest demand for flights based on searches. 17% potential increase in price (₱153,063 potential increase over avg. RT price).

Search Deals

Cheapest flight prices on average. 8% potential price decrease (₱53,551 potential savings vs. average RT price).

Search Deals

Average for round-trip flights in July 2025

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Find flight deals from Cebu to Kota Kinabalu

Cheapest flights from Cebu to Kota Kinabalu
Explore the most affordable flight options available from Cebu to Kota Kinabalu. Find the lowest fares from popular airlines and budget airlines, with prices last updated on July 3, 2025.

Tue 9/212:15 amCEB - BKI

1 stop25h 05mPhilippines AirAsia

Wed 9/171:45 amBKI - CEB

1 stop21h 45mPhilippines AirAsia

Deal found 7/2₱6,917

Wed 9/310:30 amCEB - BKI

1 stop14h 50mMultiple Airlines

Wed 9/171:45 amBKI - CEB

2 stops18h 40mMultiple Airlines

Deal found 7/2₱9,785

Tue 9/22:15 amCEB - BKI

1 stop17h 10mScoot

Thu 9/1812:15 pmBKI - CEB

1 stop13h 25mScoot

Deal found 7/2₱26,487

Best flights from Cebu to Kota Kinabalu
Discover carefully curated flight deals from Cebu to Kota Kinabalu that have cost, travel time, and layovers in mind to ensure you get the best travel experience. Data last updated July 3, 2025.

Tue 9/212:15 amCEB - BKI

1 stop25h 05mPhilippines AirAsia

Wed 9/171:45 amBKI - CEB

1 stop21h 45mPhilippines AirAsia

Deal found 7/2₱6,917

Thu 9/47:40 pmCEB - BKI

1 stop5h 40mMultiple Airlines

Fri 9/51:45 amBKI - CEB

1 stop6h 00mMultiple Airlines

Deal found 7/1₱7,030

Thu 9/44:30 amCEB - BKI

2 stops18h 25mPhilippine Airlines

Sat 9/610:20 pmBKI - CEB

2 stops24h 55mPhilippine Airlines

Deal found 7/1₱21,876

Wed 9/31:20 amCEB - BKI

1 stop22h 10mJeju Air

Fri 9/512:30 amBKI - CEB

1 stop23h 50mJeju Air

Deal found 7/1₱25,756

Tue 9/22:15 amCEB - BKI

1 stop17h 10mScoot

Thu 9/1812:15 pmBKI - CEB

1 stop13h 25mScoot

Deal found 7/2₱26,487

Thu 9/43:35 pmCEB - BKI

1 stop29h 25mSingapore Airlines

Sat 9/612:15 pmBKI - CEB

1 stop26h 30mSingapore Airlines

Deal found 7/1₱33,011

Cheapflights Fare Finder

Use the filters below to find and compare flights from Cebu to Kota Kinabalu that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Tue 9/2

12:15 am-1:20 am

1 stop25h 05m

Kota Kinabalu

Wed 9/17

1:45 am-11:30 pm

1 stop21h 45m

₱6,917

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Wed 9/3

10:30 am-1:20 am

1 stop14h 50m

Kota Kinabalu

Wed 9/17

1:45 am-8:25 pm

2 stops18h 40m

₱9,785

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Tue 9/2

2:15 am-7:25 pm

1 stop17h 10m

Kota Kinabalu

Thu 9/18

12:15 pm-1:40 am

1 stop13h 25m

₱26,487

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Sun 10/5

7:50 am-1:20 am

1 stop17h 30m

₱3,824

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Sun 10/5

12:15 am-7:25 pm

2 stops19h 10m

₱6,017

Flights are sorted by cheapest round-trip flights first.

Deals found on 7/1

Best time to book a flight from Cebu to Kota Kinabalu

Have a flexible travel schedule? Discover the best time to fly to Kota Kinabalu from Cebu with our price prediction graph.

Estimated round-trip price

Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Cebu to Kota Kinabalu

What is the cheapest month to book a flight from Cebu to Kota Kinabalu?

Currently, January is the cheapest month in which you can book a flight from Cebu to Kota Kinabalu (average of ₱83). Flying from Cebu to Kota Kinabalu in October is currently the most expensive (average of ₱119). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from CEB to BKI?

When flying from Cebu to Kota Kinabalu, the time of day you decide to fly out makes little to no difference towards the overall price you’ll pay on tickets.

Reviews of airlines servicing Kota Kinabalu

See what other customers who have flown with Singapore Airlines, Philippine Airlines, and Scoot from Cebu to Kota Kinabalu have to say. Users have also rated airlines in terms of entertainment options, comfort, food, crew/service, and boarding process.

Singapore Airlines

8.1

Very good

1,320 reviews

Check prices

Reviews

1 / 20

10.0

Excellent

Anonymous,Nov 2024

SIN - JNB

Cabin crew in business class was just so amazing, friendly, caring and professional

Singapore Airlines

8.1

Very good

1,320 reviews

Singapore Airlines

8.1

Very good

1,320 reviews

Check prices

Reviews

1 / 20

10.0

Excellent

Anonymous,Nov 2024

SIN - JNB

Cabin crew in business class was just so amazing, friendly, caring and professional

Philippine Airlines

7.2

Good

887 reviews

Singapore Airlines

8.1

Very good

1,320 reviews

Check prices

Reviews

1 / 20

10.0

Excellent

Anonymous,Nov 2024

SIN - JNB

Cabin crew in business class was just so amazing, friendly, caring and professional

Scoot

6.7

Okay

306 reviews

Singapore Airlines

8.1

Very good

1,320 reviews

Check prices

Reviews

1 / 20

10.0

Excellent

Anonymous,Nov 2024

SIN - JNB

Cabin crew in business class was just so amazing, friendly, caring and professional

Philippines AirAsia

6.6

Okay

113 reviews

Singapore Airlines

8.1

Very good

1,320 reviews

Check prices

Reviews

1 / 20

10.0

Excellent

Anonymous,Nov 2024

SIN - JNB

Cabin crew in business class was just so amazing, friendly, caring and professional

Related info for your journey

What airport do you fly into for flights to Kota Kinabalu from Cebu?
Most people fly into Kota Kinabalu (BKI) if they book a flight to Kota Kinabalu from Cebu. Kota Kinabalu is conveniently located just 5.8 km from Kota Kinabalu’s city center.
Can I find deals for flights from Cebu to Kota Kinabalu that include hotel bookings?
Yes. In addition to deals on Cebu to Kota Kinabalu flights, Cheapflights offers vacation packages that include both flights and hotel.
How can I find direct flights from Cebu to Kota Kinabalu?
After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Cebu to Kota Kinabalu.
Can I find deals for business class flights from Cebu to Kota Kinabalu?
Yes. Cheapflights offers flight deals from Cebu to Kota Kinabalu by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.
What is the cheapest month to book a flight from Cebu to Kota Kinabalu?
Currently, January is the cheapest month in which you can book a flight from Cebu to Kota Kinabalu (average of ₱83). Flying from Cebu to Kota Kinabalu in October is currently the most expensive (average of ₱119). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

Alternative routes for Cebu to Kota Kinabalu

Manila to Kota Kinabalu flights

Davao City to Kota Kinabalu flights

Zamboanga City to Kota Kinabalu flights

Top airline flying from Cebu to Kota Kinabalu

Airline	Cheapest	Average	Flexibility	On-time
Philippines AirAsia	Cheapest₱7,997	Average₱10,472	FlexibilityNo cancel fee	On-time53%	Search Philippines AirAsia flights

Fly with Cheapflights

How does Cheapflights help users find flights from Cebu to Kota Kinabalu?

Cheapflights goes through 900+ travel sites to look for the best flight deals for flights from Cebu to Kota Kinabalu. Too many options? Cheapflights also provides filters for things like airlines, price ranges, and number of stops to help you make a decision easily.

Why should you use Cheapflights to find cheap flight tickets from Cebu to Kota Kinabalu?

Cheapflights simply makes it quick and affordable to book flights from Cebu to Kota Kinabalu by bringing together all flight options from hundreds of airlines and agencies online — and put it in one place for you to choose from. Plus, Cheapflights is 100% free to use for all.

Can Cheapflights find flights from Cebu to Kota Kinabalu with no change fees?

Need flexible booking options for your flight to Kota Kinabalu from Cebu? Don’t worry, Cheapflights have you covered. Use our search filter to only show flights with no change fees.

Can Cheapflights notify me if prices for flights from Cebu to Kota Kinabalu become cheaper?

Of course! You can now track prices for flights from Cebu to Kota Kinabalu and get an alert from Cheapflights when they change. Have a valid email address ready and click the bell icon next to the flight deals above to set up your price alerts.

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Cheap flights from Cebu to Kota Kinabalu from ₱3,824

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 10/5. Fares are subject to change and may not be available on all flights or dates of travel.

Cheap flight deals from Cebu to Kota Kinabalu

Keep the following information in mind while searching for Cebu to Kota Kinabalu flight deals. Data was last updated July 3, 2025.

Round-trip from

One-way from

Popular in

Cheapest in

Average price

Find flight deals from Cebu to Kota Kinabalu

Cheapest flights from Cebu to Kota KinabaluExplore the most affordable flight options available from Cebu to Kota Kinabalu. Find the lowest fares from popular airlines and budget airlines, with prices last updated on July 3, 2025.

Explore the most affordable flight options available from Cebu to Kota Kinabalu. Find the lowest fares from popular airlines and budget airlines, with prices last updated on July 3, 2025.

Cheapflights Fare Finder

Use the filters below to find and compare flights from Cebu to Kota Kinabalu that are best for you.

Best time to book a flight from Cebu to Kota Kinabalu

Have a flexible travel schedule? Discover the best time to fly to Kota Kinabalu from Cebu with our price prediction graph.

Cheapflights Insights

Everything you need to know about your flight from Cebu to Kota Kinabalu

What is the cheapest month to book a flight from Cebu to Kota Kinabalu?

What is the cheapest time of day to fly from CEB to BKI?

Find hourly flight availability from Cebu to Kota Kinabalu. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated July 3, 2025.

Reviews of airlines servicing Kota Kinabalu

See what other customers who have flown with Singapore Airlines, Philippine Airlines, and Scoot from Cebu to Kota Kinabalu have to say. Users have also rated airlines in terms of entertainment options, comfort, food, crew/service, and boarding process.

Related info for your journey

Find useful and relevant information for your journey from Cebu to Kota Kinabalu. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

What airport do you fly into for flights to Kota Kinabalu from Cebu?

Can I find deals for flights from Cebu to Kota Kinabalu that include hotel bookings?

How can I find direct flights from Cebu to Kota Kinabalu?

Can I find deals for business class flights from Cebu to Kota Kinabalu?

What is the cheapest month to book a flight from Cebu to Kota Kinabalu?

Browse thousands of different options on Cheapflights for your next trip

Toggle through the tabs below to find thousands of options on Cheapflights for your next trip.

Alternative routes for Cebu to Kota Kinabalu

See prices for flight routes from nearby airports that may be better suited for you.

Top airline flying from Cebu to Kota Kinabalu

Fly with Cheapflights

Find the best flight deals on Cheapflights, where travelers can enjoy low prices and a wide availability of flights to their desired destinations.

How does Cheapflights help users find flights from Cebu to Kota Kinabalu?

Why should you use Cheapflights to find cheap flight tickets from Cebu to Kota Kinabalu?

Can Cheapflights find flights from Cebu to Kota Kinabalu with no change fees?

Can Cheapflights notify me if prices for flights from Cebu to Kota Kinabalu become cheaper?

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Cheapest flights from Cebu to Kota Kinabalu
Explore the most affordable flight options available from Cebu to Kota Kinabalu. Find the lowest fares from popular airlines and budget airlines, with prices last updated on July 3, 2025.