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Cheap flights from Manila to Nagasaki from ₱14,928

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 4/4. Fares are subject to change and may not be available on all flights or dates of travel.
MNL — NGS
Apr 1 — Apr 81
1 adult
1 adult, Economy, 0 bags

Cheap flight deals from Manila to Nagasaki

Enter your travel dates to find the best prices.

Cheapest flights from Manila to Nagasaki
Explore the most affordable flight options available from Manila to Nagasaki. Find the lowest fares from popular airlines and budget airlines, with prices last updated on March 2, 2026.

Sun 5/102:50 am
MNL
-
NGS
1 stop11h 05m
Multiple Airlines
Mon 6/83:35 pm
NGS
-
MNL
1 stop8h 35m
Multiple Airlines
Deal found 2/26₱21,210
Tue 4/142:40 pm
MNL
-
NGS
1 stop17h 20m
ANA
Tue 4/219:10 pm
NGS
-
MNL
1 stop17h 20m
ANA
Deal found 2/27₱21,325
Sat 5/92:50 am
MNL
-
NGS
1 stop11h 05m
Multiple Airlines
Mon 6/83:35 pm
NGS
-
MNL
1 stop8h 35m
Multiple Airlines
Deal found 2/26₱23,688
Sun 7/2612:40 am
MNL
-
NGS
1 stop9h 10m
Jetstar Japan
Fri 7/3111:30 am
NGS
-
MNL
1 stop13h 10m
Jetstar Japan
Deal found 3/1₱25,072
Sun 4/122:40 pm
MNL
-
NGS
1 stop17h 20m
ANA
Sun 4/1911:00 am
NGS
-
MNL
1 stop27h 30m
ANA
Deal found 2/25₱25,187

Find flight deals from Manila to Nagasaki

Discover tips and strategies to find the most affordable flight options for your journey from Manila (MNL) to Nagasaki (NGS). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated March 2, 2026.

Round-trip from

₱21,210

One-way from

₱14,928
5/10-6/8
  • 5/10-6/8
  • 2 total stops
  • 19h 40m total
  • Manila to Nagasaki
Search Deals
4/4
  • 4/4
  • 1 total stop
  • 11h 05m total
  • Manila to Nagasaki
Search Deals

Cheapflights Fare Finder

 
Customize your flight search to find flights from Manila to Nagasaki that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated March 2, 2026.
Use the filters below to find and compare flights from Manila to Nagasaki that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

ManilaNagasaki

MNL - NGS

MNLNGS

Manila Ninoy Aquino Intl

Sun 5/10

2:50 am-2:55 pm

1 stop11h 05m

Nagasaki

Mon 6/8

3:35 pm-11:10 pm

1 stop8h 35m

₱21,210

ManilaNagasaki

MNL - NGS

MNLNGS

Manila Ninoy Aquino Intl

Tue 4/14

2:40 pm-9:00 am

1 stop17h 20m

Nagasaki

Tue 4/21

9:10 pm-1:30 pm

1 stop17h 20m

₱21,325

ManilaNagasaki

MNL - NGS

MNLNGS

Manila Ninoy Aquino Intl

Sun 7/26

12:40 am-10:50 am

1 stop9h 10m

Nagasaki

Fri 7/31

11:30 am-11:40 pm

1 stop13h 10m

₱25,072

ManilaNagasaki

MNL - NGS

MNLNGS

Manila Ninoy Aquino Intl

Sun 4/12

2:40 pm-9:00 am

1 stop17h 20m

Nagasaki

Sun 4/19

11:00 am-1:30 pm

1 stop27h 30m

₱25,187

ManilaNagasaki

MNL - NGS

MNLNGS

Manila Ninoy Aquino Intl

Sun 5/10

3:00 pm-10:50 am

2 stops18h 50m

Nagasaki

Mon 6/8

3:35 pm-8:10 pm

2 stops29h 35m

₱27,492

ManilaNagasaki

MNL - NGS

MNLNGS

Manila Ninoy Aquino Intl

Sun 4/12

10:50 am-9:20 am

2 stops21h 30m

Nagasaki

Sun 4/19

11:30 am-11:20 am

2 stops24h 50m

₱30,662

ManilaNagasaki

MNL - NGS

MNLNGS

Manila Ninoy Aquino Intl

Sun 4/5

12:30 pm-8:50 am

2 stops19h 20m

₱17,867

Flights are sorted by cheapest round-trip flights first.

Deals found on 2/27

Sorted by cheapest first

Best time to book a flight from Manila to Nagasaki

Have a flexible travel schedule? Discover the best time to fly to Nagasaki from Manila with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Manila to Nagasaki

What is the cheapest month to book a flight from Manila to Nagasaki?

Currently, January is the cheapest month in which you can book a flight from Manila to Nagasaki (average of ₱6,801). Flying from Manila to Nagasaki in March is currently the most expensive (average of ₱11,873). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

Reviews of airlines servicing Nagasaki

Get insights into the airlines that provide service to Nagasaki. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Nagasaki. Reviews last updated March 2, 2026.
Peruse reviews from past customers who have flown with Japan Airlines from Manila to Nagasaki to help guide your decision. You can also see how each airline stacks up in terms of entertainment options, comfort, food, crew/service, and boarding process.
Japan Airlines
8.3
Very good
1,720 reviews
Check prices

Overall

8.3

Crew

8.7

Comfort

8.2

Entertainment

7.8

Boarding

8.4

Food

7.7

Reviews

1 / 20
10.0
Excellent

Anonymous,Nov 2025

BKK - NRT

Everything was was a great experience, the staff was very friendly and always had a smile on the face.
Japan Airlines
8.3
Very good
1,720 reviews
Japan Airlines
8.3
Very good
1,720 reviews
Check prices

Overall

8.3

Crew

8.7

Comfort

8.2

Entertainment

7.8

Boarding

8.4

Food

7.7

Reviews

1 / 20
10.0
Excellent

Anonymous,Nov 2025

BKK - NRT

Everything was was a great experience, the staff was very friendly and always had a smile on the face.

Related info for your journey

Find useful and relevant information for your journey from Manila to Nagasaki. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • How long is the flight from Manila to Nagasaki?

    Airlines like ANA and Jetstar Japan fly from Manila to Nagasaki in about 9h 10m. The time it takes to get you to your destination can typically vary by up to 8h 10m. Manila and Nagasaki are separated by a distance of 2235 km. When browsing for deals, the options you’ll see will be for both direct flights and flights with stops.

  • What is the cheapest airline to fly from Manila to Nagasaki round-trip?

    Flying on Japan Airlines is currently your cheapest option to Nagasaki, with prices starting at ₱16,727.

  • Can I find deals for flights from Manila to Nagasaki that include hotel bookings?

    Yes. In addition to deals on Manila to Nagasaki flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Manila to Nagasaki?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Manila to Nagasaki.

  • Can I find deals for business class flights from Manila to Nagasaki?

    Yes. Cheapflights offers flight deals from Manila to Nagasaki by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Manila to Nagasaki?

    Currently, January is the cheapest month in which you can book a flight from Manila to Nagasaki (average of ₱6,801). Flying from Manila to Nagasaki in March is currently the most expensive (average of ₱11,873). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

Toggle through the tabs below to find thousands of options on Cheapflights for your next trip.

Complete your trip

Complete your trip to Nagasaki by adding a car rental and/or hotel reservation to your travel itinerary.
Nagasaki car rentals
Kumamoto Airport car rentals
Saga Airport car rentals
Tsushima car rentals

Top airline flying from Manila to Nagasaki

Discover the top airline that operate flights from Manila to Nagasaki. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated March 2, 2026.
AirlineCheapestAverageFlexibilityOn-time
Japan AirlinesCheapest₱16,727Average₱27,595FlexibilityNo cancel feeOn-time79%
Search Japan Airlines flights

Fly with Cheapflights

Find the best flight deals on Cheapflights, where travelers can enjoy low prices and a wide availability of flights to their desired destinations.

How does Cheapflights help users find flights from Manila to Nagasaki?

Cheapflights helps you search for flights from Manila to Nagasaki via 900+ travel sites so you don’t have to. After performing a flight search, users can also filter their flight selection by filtering for price, number of stops, airlines, and so on.

Why should you use Cheapflights to find cheap flight tickets from Manila to Nagasaki?

By finding flights from multiple airlines and providers at completely no cost, Cheapflights helps millions of users like you annually find the best flights to Nagasaki from Manila.

Can Cheapflights find flights from Manila to Nagasaki with no change fees?

Yes, we can. To see specific flights from Manila to Nagasaki with no change fees, users can toggle flexible booking options after using the search form above to find flights.

Can Cheapflights notify me if prices for flights from Manila to Nagasaki become cheaper?

Yes, Cheapflights offers price alerts on Manila to Nagasaki flights so you can book your travel at the perfect time. Price Alerts can be enabled by clicking the bell icon next to the flight deals above and providing your email address where you want to receive the alerts.

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