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Cheap flights from Manila to Japan from ₱5,370

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 6/7. Fares are subject to change and may not be available on all flights or dates of travel.
MNL — FUK
Feb 23 — Mar 21
1 adult
1 adult, Economy, 0 bags

Cheap flight deals from Manila to Japan

Enter your travel dates to find the best prices.

Cheapest flights from Manila to Japan
Explore the most affordable flight options available from Manila to Japan. Find the lowest fares from popular airlines and budget airlines, with prices last updated on January 24, 2026.

Thu 8/134:35 am
MNL
-
NRT
Nonstop4h 35m
Philippines AirAsia
Fri 8/2111:10 am
NRT
-
MNL
Nonstop4h 40m
Philippines AirAsia
Deal found 1/22₱10,209
Thu 7/234:35 am
MNL
-
NRT
Nonstop4h 35m
Multiple Airlines
Sat 7/2512:50 pm
NRT
-
MNL
Nonstop5h 15m
Multiple Airlines
Deal found 1/22₱10,268
Fri 6/512:15 pm
MNL
-
NRT
Nonstop4h 45m
Cebu Pacific
Tue 6/91:45 pm
NRT
-
MNL
Nonstop5h 25m
Cebu Pacific
Deal found 1/23₱10,327
Fri 8/144:35 am
MNL
-
NRT
Nonstop4h 35m
Philippines AirAsia
Wed 8/1911:10 am
NRT
-
MNL
Nonstop4h 40m
Philippines AirAsia
Deal found 1/22₱10,386
Thu 3/510:50 pm
MNL
-
NRT
1 stop8h 20m
Cebu Pacific
Fri 3/612:50 pm
NRT
-
MNL
Nonstop5h 30m
Cebu Pacific
Deal found 1/22₱10,445
Thu 6/44:35 am
MNL
-
NRT
Nonstop4h 35m
Multiple Airlines
Fri 6/128:55 am
NRT
-
MNL
1 stop14h 10m
Multiple Airlines
Deal found 1/22₱10,504
Thu 6/44:35 am
MNL
-
NRT
Nonstop4h 35m
Philippines AirAsia
Fri 6/1211:10 am
NRT
-
MNL
Nonstop4h 40m
Philippines AirAsia
Deal found 1/23₱10,563
Sun 8/24:35 am
MNL
-
NRT
Nonstop4h 35m
Multiple Airlines
Thu 8/67:15 pm
NRT
-
MNL
Nonstop5h 20m
Multiple Airlines
Deal found 1/23₱10,622
Wed 6/2412:15 pm
MNL
-
NRT
Nonstop4h 45m
Cebu Pacific
Wed 7/17:25 pm
NRT
-
MNL
Nonstop5h 10m
Cebu Pacific
Deal found 1/23₱10,681
Fri 6/512:15 pm
MNL
-
NRT
Nonstop4h 45m
Cebu Pacific
Thu 6/118:55 am
NRT
-
MNL
1 stop12h 10m
Cebu Pacific
Deal found 1/22₱10,740
Tue 8/114:35 am
MNL
-
NRT
Nonstop4h 35m
Philippines AirAsia
Thu 8/2011:10 am
NRT
-
MNL
Nonstop4h 40m
Philippines AirAsia
Deal found 1/22₱10,799
Sun 5/34:35 am
MNL
-
NRT
Nonstop4h 35m
Philippines AirAsia
Tue 5/1211:10 am
NRT
-
MNL
Nonstop4h 40m
Philippines AirAsia
Deal found 1/23₱10,858

Find flight deals from Manila to Japan

Keep the following information in mind while searching for Manila to Japan flight deals. Data was last updated January 24, 2026.

Round-trip from

₱10,327

One-way from

₱5,370

Popular in

December

Cheapest in

September

Average price

₱15,343

Good round-trip deal

₱11,229 or less

Good one-way deal

₱6,379 or less
Cebu Pacific
  • Cebu Pacific
  • 6/5-6/9
  • Nonstop
  • 10h 10m total
  • Manila to Japan
Search Deals
Cebu Pacific
  • Cebu Pacific
  • 6/7
  • 1 total stop
  • 9h 35m total
  • Manila to Japan
Search Deals
Highest demand for flights based on searches. 15% potential increase in price (₱145,037 potential increase over avg. RT price).
Search Deals
Cheapest flight prices on average. 4% potential price decrease (₱32,472 potential savings vs. average RT price).
Search Deals
Average for round-trip flights in January 2026
Search Deals
Price to beat on a round-trip flight from Manila Ninoy Aquino Intl to Japan.
Search Deals
Price to beat on a one-way flight from Manila Ninoy Aquino Intl to Japan.
Search Deals

Cheapflights Fare Finder

 
Customize your flight search to find flights from Manila to Japan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated January 24, 2026.
Use the filters below to find and compare flights from Manila to Japan that are best for you.

Fly from

Manila

Fly to

Japan

Route

Depart

Return

Price

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Sat 7/11

4:35 am-10:10 am

Nonstop4h 35m

Tokyo Narita

Sat 7/18

11:10 am-2:50 pm

Nonstop4h 40m

₱12,039

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Thu 5/21

4:35 am-10:10 am

Nonstop4h 35m

Tokyo Narita

Mon 5/25

11:10 am-2:50 pm

Nonstop4h 40m

₱12,039

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Mon 5/11

4:35 am-10:10 am

Nonstop4h 35m

Tokyo Narita

Mon 5/18

11:10 am-2:50 pm

Nonstop4h 40m

₱12,865

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Wed 5/20

4:35 am-10:10 am

Nonstop4h 35m

Tokyo Narita

Sun 5/24

11:10 am-2:50 pm

Nonstop4h 40m

₱12,983

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Mon 5/25

4:35 am-10:10 am

Nonstop4h 35m

Tokyo Narita

Sun 5/31

11:10 am-2:50 pm

Nonstop4h 40m

₱12,983

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Thu 3/5

5:45 am-3:35 pm

1 stop8h 50m

Tokyo Narita

Tue 3/17

9:30 pm-9:40 am

1 stop13h 10m

₱13,219

ManilaFukuoka

MNL - FUK

MNLFUK

Manila Ninoy Aquino Intl

Thu 5/14

10:50 am-12:45 pm

1 stop24h 55m

Fukuoka

Thu 5/21

4:40 pm-10:55 pm

1 stop7h 15m

₱13,278

ManilaNagoya

MNL - NGO

MNLNGO

Manila Ninoy Aquino Intl

Sun 3/1

7:30 am-12:25 pm

Nonstop3h 55m

Nagoya Chubu Centrair Intl

Sat 3/14

1:55 pm-5:40 pm

Nonstop4h 45m

₱14,045

ManilaOsaka

MNL - KIX

MNLKIX

Manila Ninoy Aquino Intl

Wed 5/27

12:40 am-2:00 pm

1 stop12h 20m

Osaka Kansai Intl

Sun 5/31

10:25 pm-1:50 am

Nonstop4h 25m

₱14,104

ManilaOsaka

MNL - KIX

MNLKIX

Manila Ninoy Aquino Intl

Sat 4/18

8:00 am-6:05 pm

1 stop9h 05m

Osaka Kansai Intl

Sat 5/2

5:35 pm-12:15 am

1 stop7h 40m

₱14,399

Flights are sorted by cheapest round-trip flights first.

Deals found on 1/23

Showing 1-10 of 60 results
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Best time to book a flight from Manila to Japan

Have a flexible travel schedule? Discover the best time to fly to Japan from Manila with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Manila to Japan

What is the cheapest month to book a flight from Manila to Japan?

Currently, August is the cheapest month in which you can book a flight from Manila to Japan (average of ₱4,485). Flying from Manila to Japan in December is currently the most expensive (average of ₱9,501). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from MNL to JP?

Find hourly flight availability from Manila to Japan. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated January 24, 2026.

A simple way to save on the total cost of your ticket is to fly from Manila to Japan in the evening. If you’re flexible enough to do this you can expect to save up to 37% on your trip compared to booking a flight at noon.

What is the cheapest day to fly from Manila to Japan?

Use this chart to determine the cheapest time to fly round-trip from Manila to Japan. Price data was last updated on January 17, 2026.

Travelers seeking maximum savings on their Manila to Japan flight should consider departing on Saturday afternoons when fares are most often at their lowest. Saturday at noon flights should be avoided if possible as fares are typically the most expensive at this time.

Weekly flight availability from Manila to Japan

Explore weekly flight availability from Manila to Japan. Discover flights operating on different days of the week, giving you the flexibility to choose a travel day that best fits your plans. Compare info to find the most convenient option for your journey. Data last updated January 24, 2026.

The most flights from MNL to JP0 are scheduled on a Wednesday (3 on average). You will have fewer flight options on Monday, which is when the least amount of flights are scheduled (1 on average).

How often are flights from Manila to Japan delayed?

About 13% of weekly flights between Manila and Japan have experienced delays in the past year, with the average delay time being 125 minutes.

What is the most punctual flight time for Manila to Japan flights?

Historically, flights departing in the morning are less likely to be delayed, whereas flights leaving at night tend to experience delays more often.

What day of the week experiences the fewest flight delays on this route?

Tuesday tends to have the lowest number of delays on this route, whereas Wednesday has historically faced a higher average of delays compared to other days of the week.

Which airline has the best punctuality record on Manila to Japan flights?

Over the last year, ANA have had the lowest number of delays on this route, with just 6% of flights being delayed.

Reviews of airlines servicing Japan

Get insights into the airlines that provide service to Japan. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Japan. Reviews last updated January 24, 2026.
Peruse reviews from past customers who have flown with Cathay Pacific, Philippine Airlines, and Cebu Pacific from Manila to Japan to help guide your decision. You can also see how each airline stacks up in terms of entertainment options, comfort, food, crew/service, and boarding process.
Cathay Pacific
7.6
Good
1,143 reviews
Check prices

Boarding

7.9

Crew

8.1

Entertainment

7.7

Food

7.3

Comfort

7.6

Overall

7.6

Reviews

1 / 20
4.0
Okay

Anonymous,Jan 2026

HKG - CTS

I went to sleep without dinner, woke up about 4 hours before landing. I asked for breakfast, waited for an hour, nothing, I asked again, still nothing after 15 minutes. I then asked for coffee, when the coffee came after half an hour, it was cold. Crew manager apologised.
Cathay Pacific
7.6
Good
1,143 reviews
Cathay Pacific
7.6
Good
1,143 reviews
Check prices

Boarding

7.9

Crew

8.1

Entertainment

7.7

Food

7.3

Comfort

7.6

Overall

7.6

Reviews

1 / 20
4.0
Okay

Anonymous,Jan 2026

HKG - CTS

I went to sleep without dinner, woke up about 4 hours before landing. I asked for breakfast, waited for an hour, nothing, I asked again, still nothing after 15 minutes. I then asked for coffee, when the coffee came after half an hour, it was cold. Crew manager apologised.
Philippine Airlines
7.3
Good
955 reviews
Cathay Pacific
7.6
Good
1,143 reviews
Check prices

Boarding

7.9

Crew

8.1

Entertainment

7.7

Food

7.3

Comfort

7.6

Overall

7.6

Reviews

1 / 20
4.0
Okay

Anonymous,Jan 2026

HKG - CTS

I went to sleep without dinner, woke up about 4 hours before landing. I asked for breakfast, waited for an hour, nothing, I asked again, still nothing after 15 minutes. I then asked for coffee, when the coffee came after half an hour, it was cold. Crew manager apologised.
Cebu Pacific
6.8
Okay
206 reviews
Cathay Pacific
7.6
Good
1,143 reviews
Check prices

Boarding

7.9

Crew

8.1

Entertainment

7.7

Food

7.3

Comfort

7.6

Overall

7.6

Reviews

1 / 20
4.0
Okay

Anonymous,Jan 2026

HKG - CTS

I went to sleep without dinner, woke up about 4 hours before landing. I asked for breakfast, waited for an hour, nothing, I asked again, still nothing after 15 minutes. I then asked for coffee, when the coffee came after half an hour, it was cold. Crew manager apologised.
Philippines AirAsia
6.7
Okay
120 reviews
Cathay Pacific
7.6
Good
1,143 reviews
Check prices

Boarding

7.9

Crew

8.1

Entertainment

7.7

Food

7.3

Comfort

7.6

Overall

7.6

Reviews

1 / 20
4.0
Okay

Anonymous,Jan 2026

HKG - CTS

I went to sleep without dinner, woke up about 4 hours before landing. I asked for breakfast, waited for an hour, nothing, I asked again, still nothing after 15 minutes. I then asked for coffee, when the coffee came after half an hour, it was cold. Crew manager apologised.

Related info for your journey

Find useful and relevant information for your journey from Manila to Japan. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly from for flights from Manila to Japan?

    If you book a flight to Japan from Manila, you will be flying from Ninoy Aquino Intl, which is the city’s only airport. Manila Ninoy Aquino Intl (MNL) is located 10.9 km from the center of Manila.

  • How popular is this Manila to Japan flight route?

    Within the past month, 4,344 users have taken a look at flights from Manila Ninoy Aquino Intl to Japan.

  • How long is the flight from Manila to Japan?

    Departing from Manila to Japan will take you 3h 55m. The distance between Manila and Japan is about 2758 km. When browsing for deals, the options you’ll see will be for both direct flights and flights with stops.

  • What are the cheapest airlines to fly from Manila to Japan one-way?

    The cheapest airlines for a one-way flight from Manila to Japan are Cebu Pacific (₱3,185), Jetstar Asia (₱3,445), and Philippines AirAsia (₱3,573).

  • What are the most popular routes from Manila to Japan?

    The most popular flight routes from Manila to Japan are Manila Ninoy Aquino Intl - Tokyo Narita, Manila Ninoy Aquino Intl - Tokyo Haneda and Manila Ninoy Aquino Intl - Osaka Kansai Intl.

  • What are the most reliable airlines from Manila to Japan?

    Before booking your flight to Japan from Manila, check out the most reliable airlines to get you to your destination on time: Cebu Pacific (93%), Philippine Airlines (90%), ANA( 90%).

  • What are the cheapest flights from Manila to Japan?

    Looking at all options, your cheapest flight can be booked for ₱3,722. While the most popular route (Manila Ninoy Aquino Intl - Tokyo Narita) can be booked for ₱8,085 on average, our data indicates ₱13,691 when flying from Manila to Japan.

  • Can I find deals for flights from Manila to Japan that include hotel bookings?

    Yes. In addition to deals on Manila to Japan flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Manila to Japan?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Manila to Japan.

  • Can I find deals for business class flights from Manila to Japan?

    Yes. Cheapflights offers flight deals from Manila to Japan by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Manila to Japan?

    Currently, August is the cheapest month in which you can book a flight from Manila to Japan (average of ₱4,485). Flying from Manila to Japan in December is currently the most expensive (average of ₱9,501). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

Toggle through the tabs below to find thousands of options on Cheapflights for your next trip.

Alternative routes for Manila to Japan

See prices for flight routes from nearby airports that may be better suited for you.
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Top 10 airlines flying from Manila to Japan

Discover the top 10 airlines that operate flights from Manila to Japan. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated January 24, 2026.
AirlineCheapestAverageFlexibilityOn-time
Jetstar JapanCheapest₱4,919Average₱13,999FlexibilityNo cancel feeOn-timeN/A
Search Jetstar Japan flights
Philippines AirAsiaCheapest₱5,288Average₱12,176FlexibilityNo cancel feeOn-time53%
Search Philippines AirAsia flights
XiamenAirCheapest₱6,614Average₱17,335FlexibilityNo cancel feeOn-time49%
Search XiamenAir flights
HK ExpressCheapest₱6,665Average₱15,733FlexibilityNo cancel feeOn-time90%
Search HK Express flights
Cebu PacificCheapest₱7,809Average₱15,921FlexibilityNo cancel feeOn-time64%
Search Cebu Pacific flights
Jetstar AsiaCheapest₱9,551Average₱13,387FlexibilityNo cancel feeOn-time86%
Search Jetstar Asia flights
ZIPAIRCheapest₱9,827Average₱18,929FlexibilityNo cancel feeOn-timeN/A
Search ZIPAIR flights
Philippine AirlinesCheapest₱11,594Average₱21,230FlexibilityNo cancel feeOn-time60%
Search Philippine Airlines flights
Cathay PacificCheapest₱13,055Average₱17,357FlexibilityNo cancel feeOn-time72%
Search Cathay Pacific flights
Greater Bay AirlinesCheapest₱13,418Average₱16,416FlexibilityNo cancel feeOn-timeN/A
Search Greater Bay Airlines flights

Fly with Cheapflights

Find the best flight deals on Cheapflights, where travelers can enjoy low prices and a wide availability of flights to their desired destinations.

How does Cheapflights help users find flights from Manila to Japan?

Cheapflights helps you search for flights from Manila to Japan via 900+ travel sites so you don’t have to. After performing a flight search, users can also filter their flight selection by filtering for price, number of stops, airlines, and so on.

Why should you use Cheapflights to find cheap flight tickets from Manila to Japan?

Cheapflights taps into our reliable network of hundreds of airlines and travel agencies to find the best deals for flights from Manila to Japan for you. Better yet — we are completely free to use.

Can Cheapflights find flights from Manila to Japan with no change fees?

Need flexible booking options for your flight to Japan from Manila? Don’t worry, Cheapflights have you covered. Use our search filter to only show flights with no change fees.

Can Cheapflights notify me if prices for flights from Manila to Japan become cheaper?

Of course! You can now track prices for flights from Manila to Japan and get an alert from Cheapflights when they change. Have a valid email address ready and click the bell icon next to the flight deals above to set up your price alerts.

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