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Cheap flights from Manila to Japan from ₱3,941

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 6/2. Fares are subject to change and may not be available on all flights or dates of travel.
MNL — FUK
Jan 30 — Feb 61
1 adult
1 adult, Economy, 0 bags

Cheap flight deals from Manila to Japan

Enter your travel dates to find the best prices.

Cheapest flights from Manila to Japan
Explore the most affordable flight options available from Manila to Japan. Find the lowest fares from popular airlines and budget airlines, with prices last updated on December 31, 2025.

Tue 12/302:30 pmMNL - NRT
Nonstop4h 20mZIPAIR
Mon 1/128:55 amNRT - MNL
Nonstop5h 05mZIPAIR
Deal found 12/29₱15,707
Tue 12/307:45 pmMNL - NRT
1 stop16h 25mCathay Pacific
Fri 1/99:00 amNRT - MNL
1 stop8h 35mCathay Pacific
Deal found 12/30₱16,001
Wed 12/317:45 pmMNL - NRT
1 stop9h 45mCathay Pacific
Sun 1/114:45 pmNRT - MNL
1 stop8h 35mCathay Pacific
Deal found 12/30₱16,060
Wed 12/317:45 pmMNL - NRT
1 stop16h 25mCathay Pacific
Wed 1/79:30 pmNRT - MNL
1 stop20h 05mCathay Pacific
Deal found 12/29₱16,118
Tue 12/307:45 pmMNL - NRT
1 stop16h 25mCathay Pacific
Mon 1/122:20 pmNRT - MNL
1 stop9h 15mCathay Pacific
Deal found 12/29₱16,177
Tue 12/302:30 pmMNL - NRT
Nonstop4h 20mMultiple Airlines
Fri 1/95:15 pmNRT - MNL
1 stop13h 30mMultiple Airlines
Deal found 12/29₱16,942
Tue 12/302:30 pmMNL - NRT
Nonstop4h 20mMultiple Airlines
Thu 1/85:15 pmNRT - MNL
1 stop13h 30mMultiple Airlines
Deal found 12/29₱17,295
Tue 12/307:45 pmMNL - NRT
1 stop16h 25mCathay Pacific
Thu 1/89:00 amNRT - MNL
1 stop10h 30mCathay Pacific
Deal found 12/30₱17,471
Tue 12/307:45 pmMNL - NRT
1 stop16h 25mCathay Pacific
Sat 1/104:45 pmNRT - MNL
1 stop8h 35mCathay Pacific
Deal found 12/30₱17,530
Wed 12/318:35 pmMNL - OKA
1 stop21h 45mMultiple Airlines
Sun 1/119:20 amOKA - MNL
1 stop21h 10mMultiple Airlines
Deal found 12/28₱21,413
Tue 12/305:45 amMNL - CTS
1 stop11h 05mCathay Pacific
Fri 1/94:00 pmCTS - MNL
1 stop9h 20mCathay Pacific
Deal found 12/28₱21,707
Wed 12/3111:20 amMNL - CTS
Nonstop5h 05mCebu Pacific
Mon 1/126:25 pmCTS - MNL
Nonstop6h 10mCebu Pacific
Deal found 12/28₱22,177

Find flight deals from Manila to Japan

Keep the following information in mind while searching for Manila to Japan flight deals. Data was last updated December 31, 2025.

Round-trip from

₱8,412

One-way from

₱3,941

Popular in

December

Cheapest in

September

Average price

₱20,060

Good round-trip deal

₱9,993 or less

Good one-way deal

₱5,894 or less
Cebu Pacific
  • Cebu Pacific
  • 6/6-6/19
  • Nonstop
  • 8h 10m total
  • Manila to Japan
Search Deals
Cebu Pacific
  • Cebu Pacific
  • 6/2
  • Nonstop
  • 4h 00m total
  • Manila to Japan
Search Deals
Highest demand for flights based on searches. 18% potential increase in price (₱168,385 potential increase over avg. RT price).
Search Deals
Cheapest flight prices on average. 5% potential price decrease (₱37,801 potential savings vs. average RT price).
Search Deals
Average for round-trip flights in December 2025
Search Deals
Price to beat on a round-trip flight from Manila Ninoy Aquino Intl to Japan.
Search Deals
Price to beat on a one-way flight from Manila Ninoy Aquino Intl to Japan.
Search Deals

Cheapflights Fare Finder

 
Customize your flight search to find flights from Manila to Japan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated December 31, 2025.
Use the filters below to find and compare flights from Manila to Japan that are best for you.

Fly from

Manila

Fly to

Japan

Route

Depart

Return

Price

ManilaFukuoka

MNL - FUK

MNLFUK

Manila Ninoy Aquino Intl

Sat 6/6

2:00 pm-7:00 pm

Nonstop4h 00m

Fukuoka

Fri 6/19

8:00 pm-11:10 pm

Nonstop4h 10m

₱8,412

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Wed 3/11

10:40 am-3:50 pm

Nonstop4h 10m

Tokyo Narita

Wed 3/18

11:25 am-3:20 pm

Nonstop4h 55m

₱10,059

ManilaOsaka

MNL - KIX

MNLKIX

Manila Ninoy Aquino Intl

Thu 5/28

2:50 am-8:05 am

Nonstop4h 15m

Osaka Kansai Intl

Sat 6/6

10:25 pm-1:50 am

Nonstop4h 25m

₱10,530

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Sun 3/15

10:40 am-3:50 pm

Nonstop4h 10m

Tokyo Narita

Tue 3/24

11:25 am-3:20 pm

Nonstop4h 55m

₱10,883

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Mon 5/4

4:35 am-10:10 am

Nonstop4h 35m

Tokyo Narita

Fri 5/15

11:10 am-2:50 pm

Nonstop4h 40m

₱11,000

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Thu 2/26

4:45 am-10:25 am

Nonstop4h 40m

Tokyo Narita

Fri 3/6

4:55 pm-9:15 pm

Nonstop5h 20m

₱11,471

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Thu 3/19

4:45 am-10:25 am

Nonstop4h 40m

Tokyo Narita

Tue 3/24

11:25 am-3:20 pm

Nonstop4h 55m

₱11,530

ManilaOsaka

MNL - KIX

MNLKIX

Manila Ninoy Aquino Intl

Fri 3/6

2:40 am-7:25 am

Nonstop3h 45m

Osaka Kansai Intl

Wed 3/11

8:00 am-11:30 pm

1 stop16h 30m

₱11,589

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Mon 3/16

4:45 am-10:25 am

Nonstop4h 40m

Tokyo Narita

Sun 3/22

11:25 am-3:20 pm

Nonstop4h 55m

₱12,706

ManilaFukuoka

MNL - FUK

MNLFUK

Manila Ninoy Aquino Intl

Fri 3/13

2:10 pm-7:00 pm

Nonstop3h 50m

Fukuoka

Mon 3/16

8:00 pm-11:10 pm

Nonstop4h 10m

₱13,236

Flights are sorted by cheapest round-trip flights first.

Deals found on 12/31

Showing 1-10 of 60 results
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Best time to book a flight from Manila to Japan

Have a flexible travel schedule? Discover the best time to fly to Japan from Manila with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Manila to Japan

What is the cheapest month to book a flight from Manila to Japan?

Currently, August is the cheapest month in which you can book a flight from Manila to Japan (average of ₱4,471). Flying from Manila to Japan in December is currently the most expensive (average of ₱9,530). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from MNL to JP?

Find hourly flight availability from Manila to Japan. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated December 31, 2025.

A simple way to save on the total cost of your ticket is to fly from Manila to Japan in the evening. If you’re flexible enough to do this you can expect to save up to 37% on your trip compared to booking a flight at noon.

What is the cheapest day to fly from Manila to Japan?

Use this chart to determine the cheapest time to fly round-trip from Manila to Japan. Price data was last updated on December 27, 2025.

Travelers seeking maximum savings on their Manila to Japan flight should consider departing on Saturday afternoons when fares are most often at their lowest. Saturday at noon flights should be avoided if possible as fares are typically the most expensive at this time.

Weekly flight availability from Manila to Japan

Explore weekly flight availability from Manila to Japan. Discover flights operating on different days of the week, giving you the flexibility to choose a travel day that best fits your plans. Compare info to find the most convenient option for your journey. Data last updated December 31, 2025.

The most flights from MNL to JP0 are scheduled on a Monday (3 on average). You will have fewer flight options on Monday, which is when the least amount of flights are scheduled (3 on average).

How often are flights from Manila to Japan delayed?

About 12% of weekly flights between Manila and Japan have experienced delays in the past year, with the average delay time being 120 minutes.

What is the most punctual flight time for Manila to Japan flights?

Historically, flights departing in the evening are less likely to be delayed, whereas flights leaving at night tend to experience delays more often.

What day of the week experiences the fewest flight delays on this route?

Tuesday tends to have the lowest number of delays on this route, whereas Wednesday has historically faced a higher average of delays compared to other days of the week.

Which airline has the best punctuality record on Manila to Japan flights?

Over the last year, ZIPAIR have had the lowest number of delays on this route, with just 5% of flights being delayed.

Reviews of airlines servicing Japan

Get insights into the airlines that provide service to Japan. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Japan. Reviews last updated December 31, 2025.
Peruse reviews from past customers who have flown with Cathay Pacific, Philippine Airlines, and Cebu Pacific from Manila to Japan to help guide your decision. You can also see how each airline stacks up in terms of entertainment options, comfort, food, crew/service, and boarding process.
Cathay Pacific
7.6
Good
1,113 reviews
Check prices

Boarding

7.9

Crew

8.1

Comfort

7.6

Entertainment

7.8

Food

7.3

Overall

7.6

Reviews

1 / 20
2.0
Mediocre

Chi-Dung,Dec 2025

HKG - SGN

Boarding was crazy. Flight was delayed for an hour and passengers were trap on flight without water for an hour. Meals were disappointedly poor. Only one round of very little beverages (I was served half of a sparkling can—didnt know why crew refused yo serve me whole can). Crew were cold and rude and unattentive. Toilets are dirty terribly. Worst flight ever.
Cathay Pacific
7.6
Good
1,113 reviews
Cathay Pacific
7.6
Good
1,113 reviews
Check prices

Boarding

7.9

Crew

8.1

Comfort

7.6

Entertainment

7.8

Food

7.3

Overall

7.6

Reviews

1 / 20
2.0
Mediocre

Chi-Dung,Dec 2025

HKG - SGN

Boarding was crazy. Flight was delayed for an hour and passengers were trap on flight without water for an hour. Meals were disappointedly poor. Only one round of very little beverages (I was served half of a sparkling can—didnt know why crew refused yo serve me whole can). Crew were cold and rude and unattentive. Toilets are dirty terribly. Worst flight ever.
Philippine Airlines
7.3
Good
944 reviews
Cathay Pacific
7.6
Good
1,113 reviews
Check prices

Boarding

7.9

Crew

8.1

Comfort

7.6

Entertainment

7.8

Food

7.3

Overall

7.6

Reviews

1 / 20
2.0
Mediocre

Chi-Dung,Dec 2025

HKG - SGN

Boarding was crazy. Flight was delayed for an hour and passengers were trap on flight without water for an hour. Meals were disappointedly poor. Only one round of very little beverages (I was served half of a sparkling can—didnt know why crew refused yo serve me whole can). Crew were cold and rude and unattentive. Toilets are dirty terribly. Worst flight ever.
Cebu Pacific
6.8
Okay
205 reviews
Cathay Pacific
7.6
Good
1,113 reviews
Check prices

Boarding

7.9

Crew

8.1

Comfort

7.6

Entertainment

7.8

Food

7.3

Overall

7.6

Reviews

1 / 20
2.0
Mediocre

Chi-Dung,Dec 2025

HKG - SGN

Boarding was crazy. Flight was delayed for an hour and passengers were trap on flight without water for an hour. Meals were disappointedly poor. Only one round of very little beverages (I was served half of a sparkling can—didnt know why crew refused yo serve me whole can). Crew were cold and rude and unattentive. Toilets are dirty terribly. Worst flight ever.
Philippines AirAsia
6.6
Okay
118 reviews
Cathay Pacific
7.6
Good
1,113 reviews
Check prices

Boarding

7.9

Crew

8.1

Comfort

7.6

Entertainment

7.8

Food

7.3

Overall

7.6

Reviews

1 / 20
2.0
Mediocre

Chi-Dung,Dec 2025

HKG - SGN

Boarding was crazy. Flight was delayed for an hour and passengers were trap on flight without water for an hour. Meals were disappointedly poor. Only one round of very little beverages (I was served half of a sparkling can—didnt know why crew refused yo serve me whole can). Crew were cold and rude and unattentive. Toilets are dirty terribly. Worst flight ever.

Related info for your journey

Find useful and relevant information for your journey from Manila to Japan. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly from for flights from Manila to Japan?

    If you book a flight to Japan from Manila, you will be flying from Ninoy Aquino Intl, which is the city’s only airport. Manila Ninoy Aquino Intl (MNL) is located 10.9 km from the center of Manila.

  • How popular is this Manila to Japan flight route?

    Within the past month, 4,726 users have taken a look at flights from Manila Ninoy Aquino Intl to Japan.

  • How long is the flight from Manila to Japan?

    Departing from Manila to Japan will take you 4h. The distance between Manila and Japan is about 2324 km. Most flights are nonstop.

  • What are the cheapest airlines to fly from Manila to Japan one-way?

    The cheapest airlines for a one-way flight from Manila to Japan are Cebu Pacific (₱3,185), Jetstar Asia (₱3,434), and Philippines AirAsia (₱3,559).

  • What are the most popular routes from Manila to Japan?

    The most popular flight routes from Manila to Japan are Manila Ninoy Aquino Intl - Tokyo Haneda, Manila Ninoy Aquino Intl - Tokyo Narita and Manila Ninoy Aquino Intl - Osaka Kansai Intl.

  • What are the most reliable airlines from Manila to Japan?

    Before booking your flight to Japan from Manila, check out the most reliable airlines to get you to your destination on time: Cebu Pacific (93%), Philippine Airlines (84%), ANA( 84%).

  • What are the cheapest flights from Manila to Japan?

    Looking at all options, your cheapest flight can be booked for ₱2,762. While the most popular route (Manila Ninoy Aquino Intl - Tokyo Haneda) can be booked for ₱14,471 on average, our data indicates ₱11,177 when flying from Manila to Japan.

  • Can I find deals for flights from Manila to Japan that include hotel bookings?

    Yes. In addition to deals on Manila to Japan flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Manila to Japan?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Manila to Japan.

  • Can I find deals for business class flights from Manila to Japan?

    Yes. Cheapflights offers flight deals from Manila to Japan by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Manila to Japan?

    Currently, August is the cheapest month in which you can book a flight from Manila to Japan (average of ₱4,471). Flying from Manila to Japan in December is currently the most expensive (average of ₱9,530). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

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Alternative routes for Manila to Japan

See prices for flight routes from nearby airports that may be better suited for you.
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Top 10 airlines flying from Manila to Japan

Discover the top 10 airlines that operate flights from Manila to Japan. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated December 31, 2025.
AirlineCheapestAverageFlexibilityOn-time
XiamenAirCheapest₱6,597Average₱17,394FlexibilityNo cancel feeOn-time49%
Search XiamenAir flights
HK ExpressCheapest₱7,196Average₱15,443FlexibilityNo cancel feeOn-time90%
Search HK Express flights
Jetstar JapanCheapest₱7,826Average₱14,099FlexibilityNo cancel feeOn-timeN/A
Search Jetstar Japan flights
Cebu PacificCheapest₱7,837Average₱15,846FlexibilityNo cancel feeOn-time64%
Search Cebu Pacific flights
Philippines AirAsiaCheapest₱8,064Average₱12,198FlexibilityNo cancel feeOn-time53%
Search Philippines AirAsia flights
Jetstar AsiaCheapest₱9,593Average₱13,560FlexibilityNo cancel feeOn-time86%
Search Jetstar Asia flights
Philippine AirlinesCheapest₱11,563Average₱21,273FlexibilityNo cancel feeOn-time60%
Search Philippine Airlines flights
ZIPAIRCheapest₱12,071Average₱18,995FlexibilityNo cancel feeOn-timeN/A
Search ZIPAIR flights
Cathay PacificCheapest₱12,729Average₱17,302FlexibilityNo cancel feeOn-time72%
Search Cathay Pacific flights
Greater Bay AirlinesCheapest₱13,376Average₱16,364FlexibilityNo cancel feeOn-timeN/A
Search Greater Bay Airlines flights

Fly with Cheapflights

Find the best flight deals on Cheapflights, where travelers can enjoy low prices and a wide availability of flights to their desired destinations.

How does Cheapflights help users find flights from Manila to Japan?

Cheapflights helps you search for flights from Manila to Japan via 900+ travel sites so you don’t have to. After performing a flight search, users can also filter their flight selection by filtering for price, number of stops, airlines, and so on.

Why should you use Cheapflights to find cheap flight tickets from Manila to Japan?

Cheapflights taps into our reliable network of hundreds of airlines and travel agencies to find the best deals for flights from Manila to Japan for you. Better yet — we are completely free to use.

Can Cheapflights find flights from Manila to Japan with no change fees?

Need flexible booking options for your flight to Japan from Manila? Don’t worry, Cheapflights have you covered. Use our search filter to only show flights with no change fees.

Can Cheapflights notify me if prices for flights from Manila to Japan become cheaper?

Of course! You can now track prices for flights from Manila to Japan and get an alert from Cheapflights when they change. Have a valid email address ready and click the bell icon next to the flight deals above to set up your price alerts.

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