Cheap flights from Manila to Japan from ₱6,886

MNL — FUK
Nov 29 — Dec 61
1 adult
1 adult, Economy, 0 bags

Cheap flight deals from Manila to Japan

Enter your travel dates to find the best prices.

Cheapest flights from Manila to Japan

Mon 12/77:45 am -
Nonstop3h 50m
Fri 12/112:05 pm -
Nonstop5h 00m
Deal found 10/28₱16,068
Wed 12/27:45 am -
Nonstop3h 50m
Wed 12/92:05 pm -
Nonstop5h 00m
Deal found 10/27₱16,514
Thu 12/37:45 am -
Nonstop3h 50m
Wed 12/92:05 pm -
Nonstop5h 00m
Deal found 10/27₱17,088
Wed 12/26:15 pm -
1 stop12h 45m
Mon 12/72:05 pm -
Nonstop5h 00m
Deal found 10/26₱17,279
Sat 12/127:45 am -
Nonstop3h 50m
Sun 12/132:05 pm -
Nonstop5h 00m
Deal found 10/26₱17,407
Tue 12/112:15 pm -
Nonstop4h 30m
Wed 12/28:55 am -
2 stops16h 30m
Deal found 10/26₱17,726
Mon 11/3010:45 pm -
1 stop8h 15m
Sat 12/52:05 pm -
Nonstop5h 00m
Deal found 10/27₱17,726
Fri 12/117:45 am -
Nonstop3h 50m
Wed 12/162:05 pm -
Nonstop5h 00m
Deal found 10/26₱18,044
Tue 12/157:45 am -
Nonstop3h 50m
Mon 1/111:15 pm -
1 stop11h 00m
Deal found 10/27₱18,299
Sun 11/12:40 am -
1 stop18h 50m
Tue 11/107:00 pm -
Nonstop5h 30m
Deal found 10/29₱18,491
Sat 10/319:50 pm -
1 stop9h 05m
Sun 11/17:00 pm -
Nonstop5h 35m
Deal found 10/25₱18,618
Thu 12/102:20 pm -
Nonstop3h 40m
Wed 12/168:00 pm -
Nonstop4h 15m
Deal found 10/25₱18,682

Find flight deals from Manila to Japan

Round-trip from

₱15,494

One-way from

₱6,886

Popular in

December

Cheapest in

February

Average price

₱20,340

Good round-trip deal

₱16,373 or less

Good one-way deal

₱9,201 or less
Cebu Pacific
  • Cebu Pacific
  • 2/2-2/8
  • Nonstop
  • 8h 50m total
  • Manila to Japan
Cebu Pacific
  • Cebu Pacific
  • 1/28-12/31
  • Nonstop
  • 3h 50m total
  • Manila to Japan
Highest demand for flights based on searches. 4% potential increase in price (₱58,237 potential increase over avg. RT price).
Cheapest flight prices on average. 2% potential price decrease (₱25,226 potential savings vs. average RT price).
Average for round-trip flights in October 2026
Price to beat on a round-trip flight from Manila Ninoy Aquino Intl to Japan.
Price to beat on a one-way flight from Manila Ninoy Aquino Intl to Japan.

Cheapflights Fare Finder

 
Use the filters below to find and compare flights from Manila to Japan that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

Cheapest round-trip

ManilaOkinawa

MNL Manila Ninoy Aquino Intl - OKA Okinawa Naha

MNLOKA

Manila Ninoy Aquino Intl

Tue 12/8

7:45 am-6:10 pm

1 stop9h 25m

Okinawa Naha

Wed 12/31

12:00 am-11:00 pm

Nonstop0h 00m

₱8,289

ManilaOkinawa

MNL Manila Ninoy Aquino Intl - OKA Okinawa Naha

MNLOKA

Manila Ninoy Aquino Intl

Sun 11/29

2:40 am-11:35 am

1 stop7h 55m

Okinawa Naha

Wed 12/31

12:00 am-11:00 pm

Nonstop0h 00m

₱8,735
Quickest round-trip

ManilaFukuoka

MNL Manila Ninoy Aquino Intl - FUK Fukuoka

MNLFUK

Manila Ninoy Aquino Intl

Tue 2/2

2:20 pm-7:00 pm

Nonstop3h 40m

Fukuoka

Wed 12/31

12:00 am-11:00 pm

Nonstop0h 00m

₱8,927

ManilaFukuoka

MNL Manila Ninoy Aquino Intl - FUK Fukuoka

MNLFUK

Manila Ninoy Aquino Intl

Sat 12/5

2:20 pm-7:00 pm

Nonstop3h 40m

Fukuoka

Wed 12/31

12:00 am-11:00 pm

Nonstop0h 00m

₱10,010

ManilaOsaka

MNL Manila Ninoy Aquino Intl - KIX Osaka Kansai Intl

MNLKIX

Manila Ninoy Aquino Intl

Tue 3/30

2:45 am-8:20 am

Nonstop4h 35m

Osaka Kansai Intl

Wed 12/31

12:00 am-11:00 pm

Nonstop0h 00m

₱10,202

ManilaOsaka

MNL Manila Ninoy Aquino Intl - KIX Osaka Kansai Intl

MNLKIX

Manila Ninoy Aquino Intl

Fri 3/5

12:50 am-6:40 pm

1 stop16h 50m

Osaka Kansai Intl

Wed 12/31

12:00 am-11:00 pm

Nonstop0h 00m

₱10,839

ManilaTokyo

MNL Manila Ninoy Aquino Intl - HND Tokyo Haneda

MNLHND

Manila Ninoy Aquino Intl

Mon 1/25

7:10 pm-12:15 am

Nonstop4h 05m

Tokyo Haneda

Wed 12/31

12:00 am-11:00 pm

Nonstop0h 00m

₱11,349

ManilaOkinawa

MNL Manila Ninoy Aquino Intl - OKA Okinawa Naha

MNLOKA

Manila Ninoy Aquino Intl

Mon 11/23

2:20 am-7:20 pm

1 stop16h 00m

Okinawa Naha

Wed 12/31

12:00 am-11:00 pm

Nonstop0h 00m

₱11,477

ManilaOsaka

MNL Manila Ninoy Aquino Intl - KIX Osaka Kansai Intl

MNLKIX

Manila Ninoy Aquino Intl

Sat 11/28

2:40 am-7:20 am

Nonstop3h 40m

Osaka Kansai Intl

Wed 12/31

12:00 am-11:00 pm

Nonstop0h 00m

₱11,541

ManilaNagoya

MNL Manila Ninoy Aquino Intl - NGO Nagoya Chubu Centrair Intl

MNLNGO

Manila Ninoy Aquino Intl

Sat 11/28

2:20 am-7:45 pm

1 stop16h 25m

Nagoya Chubu Centrair Intl

Wed 12/31

12:00 am-11:00 pm

Nonstop0h 00m

₱11,541

Flights are sorted by cheapest round-trip flights first.

Deals found on 10/30

Showing 1-10 of 60 resultsSorted by cheapest first
1
2
3
...
6

Best time to book a flight from Manila to Japan

Have a flexible travel schedule? Discover the best time to fly to Japan from Manila with our price prediction graph.
Estimated round-trip price

Cheapflights Insights

Everything you need to know about your flight from Manila to Japan

What is the cheapest month to book a flight from Manila to Japan?

Currently, February is the cheapest month in which you can book a flight from Manila to Japan (average of ₱16,960). Flying from Manila to Japan in December is currently the most expensive (average of ₱24,038). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from MNL to JP?

A simple way to save on the total cost of your ticket is to fly from Manila to Japan at noon. If you’re flexible enough to do this you can expect to save up to 28% on your trip compared to booking a flight in the afternoon.

Weekly flight availability from Manila to Japan

The most flights from MNL to JP0 are scheduled on a Wednesday (3 on average). You will have fewer flight options on Tuesday, which is when the least amount of flights are scheduled (1 on average).

How often are flights from Manila to Japan delayed?

About 10% of weekly flights between Manila and Japan have experienced delays in the past year, with the average delay time being 130 minutes.

What is the most punctual flight time for Manila to Japan flights?

Historically, flights departing in the evening are less likely to be delayed, whereas flights leaving at night tend to experience delays more often.

What day of the week experiences the fewest flight delays on this route?

Thursday tends to have the lowest number of delays on this route, whereas Saturday has historically faced a higher average of delays compared to other days of the week.

Which airline has the best punctuality record on Manila to Japan flights?

Over the last year, ANA have had the lowest number of delays on this route, with just 5% of flights being delayed.

How far ahead should I book a flight from Manila to Japan?

The best time to book flights from Manila to Japan is 88 days before your desired departure date. The cost of your flight will likely increase significantly if you book two weeks in advance of your flight.

What is the cheapest day to fly from Manila to Japan?

Travelers seeking maximum savings on their Manila to Japan flight should consider departing on Friday evenings when fares are most often at their lowest. Thursday afternoons flights should be avoided if possible as fares are typically the most expensive at this time.

Reviews of airlines servicing Japan

Peruse reviews from past customers who have flown with Cathay Pacific,Philippine Airlines, andCebu Pacific from Manila to Japan to help guide your decision. You can also see how each airline stacks up in terms of entertainment options, comfort, food, crew/service, and boarding process.

Comfort

7.6

Crew

8.1

Boarding

7.9

Entertainment

7.8

Overall

7.6

Food

7.3

Reviews

1 / 20
4.0
Okay

Paden,Oct 2026

SEA - HKG

Ground staff at Seattle counter were excellent . Business class on board experience was very disappointing. There was no pajamas, no bed turn down service and the service was very mediocre took long time to get one extra roll of bread. Not very forthcoming quite curt in general. Also was situated in the middle row first row whole night being right next to the toilet not able to get any sleep. The entertainment wad very outdated too! Sorry to complain but I had high hopes for Cathay as I have flow years ago and the experience then was like night and day. Usually fly Qatar or Emirates the service doesn't compare. My flight from HKG to Delhi was much better. Thanks

Comfort

7.6

Crew

8.1

Boarding

7.9

Entertainment

7.8

Overall

7.6

Food

7.3

Reviews

1 / 20
4.0
Okay

Paden,Oct 2026

SEA - HKG

Ground staff at Seattle counter were excellent . Business class on board experience was very disappointing. There was no pajamas, no bed turn down service and the service was very mediocre took long time to get one extra roll of bread. Not very forthcoming quite curt in general. Also was situated in the middle row first row whole night being right next to the toilet not able to get any sleep. The entertainment wad very outdated too! Sorry to complain but I had high hopes for Cathay as I have flow years ago and the experience then was like night and day. Usually fly Qatar or Emirates the service doesn't compare. My flight from HKG to Delhi was much better. Thanks

Comfort

7.6

Crew

8.1

Boarding

7.9

Entertainment

7.8

Overall

7.6

Food

7.3

Reviews

1 / 20
4.0
Okay

Paden,Oct 2026

SEA - HKG

Ground staff at Seattle counter were excellent . Business class on board experience was very disappointing. There was no pajamas, no bed turn down service and the service was very mediocre took long time to get one extra roll of bread. Not very forthcoming quite curt in general. Also was situated in the middle row first row whole night being right next to the toilet not able to get any sleep. The entertainment wad very outdated too! Sorry to complain but I had high hopes for Cathay as I have flow years ago and the experience then was like night and day. Usually fly Qatar or Emirates the service doesn't compare. My flight from HKG to Delhi was much better. Thanks

Comfort

7.6

Crew

8.1

Boarding

7.9

Entertainment

7.8

Overall

7.6

Food

7.3

Reviews

1 / 20
4.0
Okay

Paden,Oct 2026

SEA - HKG

Ground staff at Seattle counter were excellent . Business class on board experience was very disappointing. There was no pajamas, no bed turn down service and the service was very mediocre took long time to get one extra roll of bread. Not very forthcoming quite curt in general. Also was situated in the middle row first row whole night being right next to the toilet not able to get any sleep. The entertainment wad very outdated too! Sorry to complain but I had high hopes for Cathay as I have flow years ago and the experience then was like night and day. Usually fly Qatar or Emirates the service doesn't compare. My flight from HKG to Delhi was much better. Thanks

Comfort

7.6

Crew

8.1

Boarding

7.9

Entertainment

7.8

Overall

7.6

Food

7.3

Reviews

1 / 20
4.0
Okay

Paden,Oct 2026

SEA - HKG

Ground staff at Seattle counter were excellent . Business class on board experience was very disappointing. There was no pajamas, no bed turn down service and the service was very mediocre took long time to get one extra roll of bread. Not very forthcoming quite curt in general. Also was situated in the middle row first row whole night being right next to the toilet not able to get any sleep. The entertainment wad very outdated too! Sorry to complain but I had high hopes for Cathay as I have flow years ago and the experience then was like night and day. Usually fly Qatar or Emirates the service doesn't compare. My flight from HKG to Delhi was much better. Thanks

Related info for your journey

  • What airport do you fly from for flights from Manila to Japan?

    If you book a flight to Japan from Manila, you will be flying from Ninoy Aquino Intl, which is the city’s only airport. Manila Ninoy Aquino Intl (MNL) is located 10.9 km from the center of Manila.

  • How popular is this Manila to Japan flight route?

  • How long is the flight from Manila to Japan?

    Departing from Manila to Japan will take you 3h 35m. The distance between Manila and Japan is about 2634 km. When browsing for deals, the options you’ll see will be for both direct flights and flights with stops.

  • What are the most popular routes from Manila to Japan?

  • What are the most reliable airlines from Manila to Japan?

    Before booking your flight to Japan from Manila, check out the most reliable airlines to get you to your destination on time: Cebu Pacific (89%), Philippine Airlines (86%), ANA( 86%).

  • What are the cheapest flights from Manila to Japan?

    Looking at all options, your cheapest flight can be booked for ₱5,506. While the most popular route (Manila Ninoy Aquino Intl - Tokyo Narita) can be booked for ₱12,752 on average, our data indicates ₱16,942 when flying from Manila to Japan.

  • Can I find deals for flights from Manila to Japan that include hotel bookings?

    Yes. In addition to deals on Manila to Japan flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Manila to Japan?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Manila to Japan.

  • Can I find deals for business class flights from Manila to Japan?

    Yes. Cheapflights offers flight deals from Manila to Japan by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Manila to Japan?

    Currently, February is the cheapest month in which you can book a flight from Manila to Japan (average of ₱16,960). Flying from Manila to Japan in December is currently the most expensive (average of ₱24,038). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

Top 10 airlines flying from Manila to Japan

AirlineCheapestAverageFlexibilityOn-time
Philippines AirAsiaCheapest₱5,704Average₱14,373FlexibilityNo cancel feeOn-time53%
Search Philippines AirAsia flights
Jetstar JapanCheapest₱6,118Average₱18,131FlexibilityNo cancel feeOn-timeN/A
Search Jetstar Japan flights
Philippine AirlinesCheapest₱8,785Average₱24,490FlexibilityNo cancel feeOn-time60%
Search Philippine Airlines flights
Cebu PacificCheapest₱8,786Average₱19,343FlexibilityNo cancel feeOn-time64%
Search Cebu Pacific flights
Greater Bay AirlinesCheapest₱10,607Average₱24,003FlexibilityNo cancel feeOn-timeN/A
Search Greater Bay Airlines flights
ZIPAIRCheapest₱10,688Average₱23,735FlexibilityNo cancel feeOn-timeN/A
Search ZIPAIR flights
XiamenAirCheapest₱12,118Average₱20,071FlexibilityNo cancel feeOn-time49%
Search XiamenAir flights
HK ExpressCheapest₱12,503Average₱27,736FlexibilityNo cancel feeOn-time90%
Search HK Express flights
Cathay PacificCheapest₱14,224Average₱23,220FlexibilityNo cancel feeOn-time72%
Search Cathay Pacific flights
Japan AirlinesCheapest₱15,101Average₱31,320FlexibilityNo cancel feeOn-time79%
Search Japan Airlines flights

Fly with Cheapflights

How does Cheapflights help users find flights from Manila to Japan?

Cheapflights helps you search for flights from Manila to Japan via 900+ travel sites so you don’t have to. After performing a flight search, users can also filter their flight selection by filtering for price, number of stops, airlines, and so on.

Why should you use Cheapflights to find cheap flight tickets from Manila to Japan?

Cheapflights taps into our reliable network of hundreds of airlines and travel agencies to find the best deals for flights from Manila to Japan for you. Better yet — we are completely free to use.

Can Cheapflights find flights from Manila to Japan with no change fees?

Need flexible booking options for your flight to Japan from Manila? Don’t worry, Cheapflights have you covered. Use our search filter to only show flights with no change fees.

Can Cheapflights notify me if prices for flights from Manila to Japan become cheaper?

Of course! You can now track prices for flights from Manila to Japan and get an alert from Cheapflights when they change. Have a valid email address ready and click the bell icon next to the flight deals above to set up your price alerts.

100% Free

Cheapflights is completely free to use, so you can start saving the moment you arrive.

Book with Flexibility

Our users can plan ahead with confidence and find flights with no change fees

Travel Smart

Millions of people come to us for their flight needs every year. We help make travel planning easy by providing useful insights and data-driven graphs that can inform your decisions.