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Cheap flights from Manila to Japan from ₱5,832

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 10/22. Fares are subject to change and may not be available on all flights or dates of travel.
MNL — FUK
Sep 15 — Sep 221
1 adult
1 adult, Economy, 0 bags

Cheap flight deals from Manila to Japan

Enter your travel dates to find the best prices.

Cheapest flights from Manila to Japan
Explore the most affordable flight options available from Manila to Japan. Find the lowest fares from popular airlines and budget airlines, with prices last updated on August 16, 2026.

Wed 8/2612:55 pm -
1 stop18h 20m
Thu 8/277:35 pm -
Nonstop4h 30m
Deal found 8/16₱13,998
Sat 9/122:50 am -
Nonstop4h 15m
Wed 9/2310:25 pm -
Nonstop4h 25m
Deal found 8/16₱14,366
Wed 9/92:50 am -
Nonstop4h 15m
Fri 9/1110:25 pm -
Nonstop4h 25m
Deal found 8/12₱14,550
Sat 9/122:50 am -
Nonstop4h 15m
Sat 9/2610:25 pm -
Nonstop4h 25m
Deal found 8/15₱14,734
Fri 11/67:35 am -
Nonstop4h 00m
Fri 11/132:05 pm -
Nonstop4h 50m
Deal found 8/14₱14,857
Fri 10/167:20 am -
Nonstop4h 15m
Thu 10/222:05 pm -
Nonstop4h 25m
Deal found 8/16₱14,919
Thu 9/1710:45 pm -
1 stop8h 30m
Fri 9/187:35 pm -
Nonstop4h 30m
Deal found 8/13₱15,226
Sat 9/191:10 pm -
Nonstop4h 10m
Mon 9/287:35 pm -
Nonstop4h 30m
Deal found 8/15₱15,410
Wed 10/72:50 am -
Nonstop4h 15m
Wed 10/1410:25 pm -
Nonstop4h 25m
Deal found 8/12₱15,655
Mon 9/287:20 am -
Nonstop4h 15m
Mon 10/52:05 pm -
Nonstop4h 25m
Deal found 8/14₱15,778
Wed 9/161:10 pm -
Nonstop4h 10m
Wed 9/237:35 pm -
Nonstop4h 30m
Deal found 8/16₱15,901
Mon 10/197:20 am -
Nonstop4h 15m
Mon 10/262:05 pm -
Nonstop4h 50m
Deal found 8/11₱15,901

Find flight deals from Manila to Japan

Keep the following information in mind while searching for Manila to Japan flight deals. Data was last updated August 16, 2026.

Round-trip from

₱13,998

One-way from

₱5,832

Popular in

December

Cheapest in

September

Average price

₱17,559

Good round-trip deal

₱15,353 or less

Good one-way deal

₱7,203 or less
Cebu Pacific
  • Cebu Pacific
  • 8/26-8/27
  • 1 total stop
  • 22h 50m total
  • Manila to Japan
Search Deals
Cebu Pacific
  • Cebu Pacific
  • 10/22
  • Nonstop
  • 3h 55m total
  • Manila to Japan
Search Deals
Highest demand for flights based on searches. 7% potential increase in price (₱78,476 potential increase over avg. RT price).
Search Deals
Cheapest flight prices on average. 3% potential price decrease (₱34,304 potential savings vs. average RT price).
Search Deals
Average for round-trip flights in August 2026
Search Deals
Price to beat on a round-trip flight from Manila Ninoy Aquino Intl to Japan.
Search Deals
Price to beat on a one-way flight from Manila Ninoy Aquino Intl to Japan.
Search Deals

Cheapflights Fare Finder

 
Customize your flight search to find flights from Manila to Japan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated August 16, 2026.
Use the filters below to find and compare flights from Manila to Japan that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

Cheapest round-trip

ManilaTokyo

MNL Manila Ninoy Aquino Intl - NRT Tokyo Narita

MNLNRT

Manila Ninoy Aquino Intl

Tue 1/19

12:50 am-6:10 am

Nonstop4h 20m

Tokyo Narita

Sat 1/23

7:00 am-1:40 am

1 stop19h 40m

₱16,699

ManilaOkinawa

MNL Manila Ninoy Aquino Intl - OKA Okinawa Naha

MNLOKA

Manila Ninoy Aquino Intl

Fri 9/4

11:35 pm-8:50 pm

1 stop20h 15m

Okinawa Naha

Thu 9/10

10:10 am-1:05 pm

1 stop27h 55m

₱20,014

ManilaOsaka

MNL Manila Ninoy Aquino Intl - KIX Osaka Kansai Intl

MNLKIX

Manila Ninoy Aquino Intl

Thu 9/24

2:50 am-8:05 am

Nonstop4h 15m

Osaka Kansai Intl

Fri 10/2

10:25 pm-1:50 am

Nonstop4h 25m

₱20,198

ManilaTokyo

MNL Manila Ninoy Aquino Intl - NRT Tokyo Narita

MNLNRT

Manila Ninoy Aquino Intl

Sat 10/10

2:50 pm-8:20 pm

Nonstop4h 30m

Tokyo Narita

Wed 10/14

9:15 am-1:05 pm

Nonstop4h 50m

₱20,812
Quickest round-trip

ManilaFukuoka

MNL Manila Ninoy Aquino Intl - FUK Fukuoka

MNLFUK

Manila Ninoy Aquino Intl

Tue 12/8

10:00 am-2:25 pm

Nonstop3h 25m

Fukuoka

Thu 12/10

3:45 pm-6:50 pm

Nonstop4h 05m

₱21,304

ManilaOsaka

MNL Manila Ninoy Aquino Intl - KIX Osaka Kansai Intl

MNLKIX

Manila Ninoy Aquino Intl

Sat 11/28

3:20 am-7:55 am

Nonstop3h 35m

Osaka Kansai Intl

Sun 12/6

9:20 pm-12:50 am

Nonstop4h 30m

₱21,488

ManilaFukuoka

MNL Manila Ninoy Aquino Intl - FUK Fukuoka

MNLFUK

Manila Ninoy Aquino Intl

Sun 1/10

10:00 am-2:25 pm

Nonstop3h 25m

Fukuoka

Sun 1/17

3:45 pm-6:50 pm

Nonstop4h 05m

₱21,795

ManilaOkinawa

MNL Manila Ninoy Aquino Intl - OKA Okinawa Naha

MNLOKA

Manila Ninoy Aquino Intl

Thu 9/3

6:35 am-5:20 pm

1 stop9h 45m

Okinawa Naha

Mon 9/7

10:30 am-8:15 pm

1 stop10h 45m

₱22,531

ManilaOsaka

MNL Manila Ninoy Aquino Intl - KIX Osaka Kansai Intl

MNLKIX

Manila Ninoy Aquino Intl

Sat 11/28

9:05 pm-1:35 pm

1 stop15h 30m

Osaka Kansai Intl

Sat 12/5

10:05 am-1:35 pm

Nonstop4h 30m

₱22,593

ManilaOsaka

MNL Manila Ninoy Aquino Intl - KIX Osaka Kansai Intl

MNLKIX

Manila Ninoy Aquino Intl

Sat 1/23

3:20 am-7:55 am

Nonstop3h 35m

Osaka Kansai Intl

Thu 1/28

10:05 am-1:35 pm

Nonstop4h 30m

₱22,961

Flights are sorted by cheapest round-trip flights first.

Deals found on 8/13

Showing 1-10 of 60 resultsSorted by cheapest first
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Best time to book a flight from Manila to Japan

Have a flexible travel schedule? Discover the best time to fly to Japan from Manila with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Manila to Japan

What is the cheapest month to book a flight from Manila to Japan?

Currently, September is the cheapest month in which you can book a flight from Manila to Japan (average of ₱14,673). Flying from Manila to Japan in December is currently the most expensive (average of ₱22,777). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from MNL to JP?

Find hourly flight availability from Manila to Japan. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated August 16, 2026.

A simple way to save on the total cost of your ticket is to fly from Manila to Japan at noon. If you’re flexible enough to do this you can expect to save up to 13% on your trip compared to booking a flight in the afternoon.

Weekly flight availability from Manila to Japan

Explore weekly flight availability from Manila to Japan. Discover flights operating on different days of the week, giving you the flexibility to choose a travel day that best fits your plans. Compare info to find the most convenient option for your journey. Data last updated August 16, 2026.

The most flights from MNL to JP0 are scheduled on a Friday (4 on average). You will have fewer flight options on Monday, which is when the least amount of flights are scheduled (2 on average).

How often are flights from Manila to Japan delayed?

About 12% of weekly flights between Manila and Japan have experienced delays in the past year, with the average delay time being 134 minutes.

What is the most punctual flight time for Manila to Japan flights?

Historically, flights departing in the morning are less likely to be delayed, whereas flights leaving at night tend to experience delays more often.

What day of the week experiences the fewest flight delays on this route?

Thursday tends to have the lowest number of delays on this route, whereas Wednesday has historically faced a higher average of delays compared to other days of the week.

Which airline has the best punctuality record on Manila to Japan flights?

Over the last year, ANA have had the lowest number of delays on this route, with just 5% of flights being delayed.

How far ahead should I book a flight from Manila to Japan?

The best time to book flights from Manila to Japan is 83 days before your desired departure date. The cost of your flight will likely increase significantly if you book two weeks in advance of your flight.

What is the cheapest day to fly from Manila to Japan?

Use this chart to determine the cheapest time to fly round-trip from Manila to Japan. Price data was last updated on August 8, 2026.

Travelers seeking maximum savings on their Manila to Japan flight should consider departing on Saturday afternoons when fares are most often at their lowest. Saturday mornings flights should be avoided if possible as fares are typically the most expensive at this time.

Reviews of airlines servicing Japan

Get insights into the airlines that provide service to Japan. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Japan. Reviews last updated August 16, 2026.
Peruse reviews from past customers who have flown with Cathay Pacific,Philippine Airlines, andCebu Pacific from Manila to Japan to help guide your decision. You can also see how each airline stacks up in terms of entertainment options, comfort, food, crew/service, and boarding process.
Cathay Pacific
7.6
Good
1,453 reviews
Check prices

Food

7.3

Entertainment

7.7

Boarding

7.9

Comfort

7.5

Overall

7.6

Crew

8.1

Reviews

1 / 20
6.0
Good

Anonymous,Jun 2026

MNL - HKG

Cathay Pacific used to be a great airline for travel to Asia. Having travelled with this carrier many times I've noticed a decline the food quality, seat pitch, and entertainment offering. The services still remains top notch as can be said with other carriers in this class (i.e. Emirates, Singapore Airlines, etc.)
Cathay Pacific
7.6
Good
1,453 reviews
Cathay Pacific
7.6
Good
1,453 reviews
Check prices

Food

7.3

Entertainment

7.7

Boarding

7.9

Comfort

7.5

Overall

7.6

Crew

8.1

Reviews

1 / 20
6.0
Good

Anonymous,Jun 2026

MNL - HKG

Cathay Pacific used to be a great airline for travel to Asia. Having travelled with this carrier many times I've noticed a decline the food quality, seat pitch, and entertainment offering. The services still remains top notch as can be said with other carriers in this class (i.e. Emirates, Singapore Airlines, etc.)
Philippine Airlines
7.3
Good
1,016 reviews
Cathay Pacific
7.6
Good
1,453 reviews
Check prices

Food

7.3

Entertainment

7.7

Boarding

7.9

Comfort

7.5

Overall

7.6

Crew

8.1

Reviews

1 / 20
6.0
Good

Anonymous,Jun 2026

MNL - HKG

Cathay Pacific used to be a great airline for travel to Asia. Having travelled with this carrier many times I've noticed a decline the food quality, seat pitch, and entertainment offering. The services still remains top notch as can be said with other carriers in this class (i.e. Emirates, Singapore Airlines, etc.)
Cebu Pacific
6.8
Okay
222 reviews
Cathay Pacific
7.6
Good
1,453 reviews
Check prices

Food

7.3

Entertainment

7.7

Boarding

7.9

Comfort

7.5

Overall

7.6

Crew

8.1

Reviews

1 / 20
6.0
Good

Anonymous,Jun 2026

MNL - HKG

Cathay Pacific used to be a great airline for travel to Asia. Having travelled with this carrier many times I've noticed a decline the food quality, seat pitch, and entertainment offering. The services still remains top notch as can be said with other carriers in this class (i.e. Emirates, Singapore Airlines, etc.)
Philippines AirAsia
6.8
Okay
126 reviews
Cathay Pacific
7.6
Good
1,453 reviews
Check prices

Food

7.3

Entertainment

7.7

Boarding

7.9

Comfort

7.5

Overall

7.6

Crew

8.1

Reviews

1 / 20
6.0
Good

Anonymous,Jun 2026

MNL - HKG

Cathay Pacific used to be a great airline for travel to Asia. Having travelled with this carrier many times I've noticed a decline the food quality, seat pitch, and entertainment offering. The services still remains top notch as can be said with other carriers in this class (i.e. Emirates, Singapore Airlines, etc.)

Related info for your journey

Find useful and relevant information for your journey from Manila to Japan. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly from for flights from Manila to Japan?

    If you book a flight to Japan from Manila, you will be flying from Ninoy Aquino Intl, which is the city’s only airport. Manila Ninoy Aquino Intl (MNL) is located 10.9 km from the center of Manila.

  • How popular is this Manila to Japan flight route?

    Within the past month, 3,228 users have taken a look at flights from Manila Ninoy Aquino Intl to Japan.

  • How long is the flight from Manila to Japan?

    Departing from Manila to Japan will take you 4h 20m. The distance between Manila and Japan is about 3050 km. When browsing for deals, the options you’ll see will be for both direct flights and flights with stops.

  • What are the cheapest airlines to fly from Manila to Japan one-way?

    The cheapest airlines for a one-way flight from Manila to Japan are Cebu Pacific (₱2,882), EVA Air (₱2,954), and Philippines AirAsia (₱4,050).

  • What are the most popular routes from Manila to Japan?

    The most popular flight routes from Manila to Japan are Manila Ninoy Aquino Intl - Tokyo Narita, Manila Ninoy Aquino Intl - Tokyo Haneda and Manila Ninoy Aquino Intl - Osaka Kansai Intl.

  • What are the most reliable airlines from Manila to Japan?

    Before booking your flight to Japan from Manila, check out the most reliable airlines to get you to your destination on time: Philippine Airlines (91%), ANA (91%), Cebu Pacific( 70%).

  • What are the cheapest flights from Manila to Japan?

    Looking at all options, your cheapest flight can be booked for ₱5,382. While the most popular route (Manila Ninoy Aquino Intl - Tokyo Narita) can be booked for ₱11,849 on average, our data indicates ₱14,592 when flying from Manila to Japan.

  • Can I find deals for flights from Manila to Japan that include hotel bookings?

    Yes. In addition to deals on Manila to Japan flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Manila to Japan?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Manila to Japan.

  • Can I find deals for business class flights from Manila to Japan?

    Yes. Cheapflights offers flight deals from Manila to Japan by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Manila to Japan?

    Currently, September is the cheapest month in which you can book a flight from Manila to Japan (average of ₱14,673). Flying from Manila to Japan in December is currently the most expensive (average of ₱22,777). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

Toggle through the tabs below to find thousands of options on Cheapflights for your next trip.

Top 10 airlines flying from Manila to Japan

Discover the top 10 airlines that operate flights from Manila to Japan. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated August 16, 2026.
AirlineCheapestAverageFlexibilityOn-time
Jetstar JapanCheapest₱4,447Average₱15,748FlexibilityNo cancel feeOn-timeN/A
Search Jetstar Japan flights
Philippines AirAsiaCheapest₱5,492Average₱12,895FlexibilityNo cancel feeOn-time53%
Search Philippines AirAsia flights
Greater Bay AirlinesCheapest₱6,240Average₱16,942FlexibilityNo cancel feeOn-timeN/A
Search Greater Bay Airlines flights
XiamenAirCheapest₱6,680Average₱13,045FlexibilityNo cancel feeOn-time49%
Search XiamenAir flights
HK ExpressCheapest₱6,934Average₱19,943FlexibilityNo cancel feeOn-time90%
Search HK Express flights
Cebu PacificCheapest₱8,296Average₱18,182FlexibilityNo cancel feeOn-time64%
Search Cebu Pacific flights
Philippine AirlinesCheapest₱8,459Average₱22,640FlexibilityNo cancel feeOn-time60%
Search Philippine Airlines flights
ZIPAIRCheapest₱9,615Average₱22,715FlexibilityNo cancel feeOn-timeN/A
Search ZIPAIR flights
Cathay PacificCheapest₱13,731Average₱20,902FlexibilityNo cancel feeOn-time72%
Search Cathay Pacific flights
China AirlinesCheapest₱14,692Average₱30,049FlexibilityNo cancel feeOn-time70%
Search China Airlines flights

Fly with Cheapflights

Find the best flight deals on Cheapflights, where travelers can enjoy low prices and a wide availability of flights to their desired destinations.

How does Cheapflights help users find flights from Manila to Japan?

Cheapflights helps you search for flights from Manila to Japan via 900+ travel sites so you don’t have to. After performing a flight search, users can also filter their flight selection by filtering for price, number of stops, airlines, and so on.

Why should you use Cheapflights to find cheap flight tickets from Manila to Japan?

Cheapflights taps into our reliable network of hundreds of airlines and travel agencies to find the best deals for flights from Manila to Japan for you. Better yet — we are completely free to use.

Can Cheapflights find flights from Manila to Japan with no change fees?

Need flexible booking options for your flight to Japan from Manila? Don’t worry, Cheapflights have you covered. Use our search filter to only show flights with no change fees.

Can Cheapflights notify me if prices for flights from Manila to Japan become cheaper?

Of course! You can now track prices for flights from Manila to Japan and get an alert from Cheapflights when they change. Have a valid email address ready and click the bell icon next to the flight deals above to set up your price alerts.

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