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Cheap flights from Manila to Japan from ₱3,886

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 12/6. Fares are subject to change and may not be available on all flights or dates of travel.
MNL — FUK
Dec 7 — Dec 141
1 adult
1 adult, Economy, 0 bags

Find flight deals from Manila to Japan

Enter your travel dates to find the best prices.

Cheapest flights from Manila to Japan
Explore the most affordable flight options available from Manila to Japan. Find the lowest fares from popular airlines and budget airlines, with prices last updated on November 7, 2025.

Wed 12/34:30 amMNL - KIX
1 stop26h 25mCebu Pacific
Fri 12/57:55 pmKIX - MNL
Nonstop4h 40mCebu Pacific
Deal found 11/5₱9,951
Mon 12/812:35 pmMNL - NRT
Nonstop4h 20mCebu Pacific
Tue 12/912:50 pmNRT - MNL
Nonstop5h 50mCebu Pacific
Deal found 11/4₱11,011
Sat 12/61:10 pmMNL - KIX
Nonstop4h 10mMultiple Airlines
Wed 12/1010:00 pmKIX - MNL
Nonstop4h 40mMultiple Airlines
Deal found 11/6₱11,246
Mon 12/812:35 pmMNL - NRT
Nonstop4h 20mMultiple Airlines
Sat 12/138:55 amNRT - MNL
Nonstop5h 05mMultiple Airlines
Deal found 11/4₱11,305
Tue 12/21:10 pmMNL - KIX
Nonstop4h 10mMultiple Airlines
Sat 12/610:00 pmKIX - MNL
Nonstop4h 40mMultiple Airlines
Deal found 11/6₱11,305
Tue 12/912:35 pmMNL - NRT
Nonstop4h 25mMultiple Airlines
Thu 12/112:45 pmNRT - MNL
1 stop9h 55mMultiple Airlines
Deal found 11/5₱11,423
Wed 12/32:40 amMNL - KIX
Nonstop3h 45mJetstar Japan
Wed 12/1010:00 pmKIX - MNL
Nonstop4h 40mJetstar Japan
Deal found 11/6₱11,482
Wed 12/32:40 amMNL - KIX
Nonstop3h 45mJetstar Japan
Thu 12/1110:00 pmKIX - MNL
Nonstop4h 40mJetstar Japan
Deal found 11/5₱11,541
Wed 12/32:40 amMNL - KIX
Nonstop3h 45mMultiple Airlines
Fri 12/57:35 pmKIX - MNL
Nonstop4h 40mMultiple Airlines
Deal found 11/6₱11,658
Wed 12/1012:35 pmMNL - NRT
Nonstop4h 25mMultiple Airlines
Sat 12/138:55 amNRT - MNL
Nonstop5h 05mMultiple Airlines
Deal found 11/7₱11,717
Thu 12/41:10 pmMNL - KIX
Nonstop4h 10mMultiple Airlines
Wed 12/102:15 pmKIX - MNL
Nonstop4h 30mMultiple Airlines
Deal found 11/6₱11,776
Fri 12/510:40 amMNL - NRT
Nonstop4h 10mMultiple Airlines
Tue 12/97:15 pmNRT - MNL
Nonstop5h 20mMultiple Airlines
Deal found 11/5₱11,894

Cheap flight deals from Manila to Japan

Keep the following information in mind while searching for Manila to Japan flight deals. Data was last updated November 7, 2025.

Round-trip from

₱9,833

One-way from

₱3,886

Popular in

December

Cheapest in

September

Average price

₱12,247

Good round-trip deal

₱10,927 or less

Good one-way deal

₱3,801 or less
Philippines AirAsia
  • Philippines AirAsia
  • 2/9-2/17
  • Nonstop
  • 9h 35m total
  • Manila to Japan
Search Deals
Cebu Pacific
  • Cebu Pacific
  • 12/6
  • Nonstop
  • 3h 40m total
  • Manila to Japan
Search Deals
Highest demand for flights based on searches. 18% potential increase in price (₱178,782 potential increase over avg. RT price).
Search Deals
Cheapest flight prices on average. 5% potential price decrease (₱39,549 potential savings vs. average RT price).
Search Deals
Average for round-trip flights in November 2025
Search Deals
Price to beat on a round-trip flight from Manila Ninoy Aquino Intl to Japan.
Search Deals
Price to beat on a one-way flight from Manila Ninoy Aquino Intl to Japan.
Search Deals

Cheapflights Fare Finder

 
Customize your flight search to find flights from Manila to Japan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated November 7, 2025.
Use the filters below to find and compare flights from Manila to Japan that are best for you.

Fly from

Manila

Fly to

Japan

Route

Depart

Return

Price

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Thu 2/26

4:45 am-10:25 am

Nonstop4h 40m

Tokyo Narita

Tue 3/3

11:25 am-3:20 pm

Nonstop4h 55m

₱9,833

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Tue 4/28

4:35 am-10:10 am

Nonstop4h 35m

Tokyo Narita

Tue 5/12

11:10 am-2:50 pm

Nonstop4h 40m

₱10,186

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Wed 2/4

4:45 am-10:25 am

Nonstop4h 40m

Tokyo Narita

Tue 2/10

11:25 am-3:20 pm

Nonstop4h 55m

₱10,716

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Fri 5/1

1:20 pm-7:05 pm

Nonstop4h 45m

Tokyo Narita

Wed 5/6

8:30 pm-12:20 am

Nonstop4h 50m

₱10,952

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Wed 3/18

10:40 am-3:50 pm

Nonstop4h 10m

Tokyo Narita

Sun 3/22

11:25 am-3:20 pm

Nonstop4h 55m

₱11,011

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Wed 2/4

4:45 am-10:25 am

Nonstop4h 40m

Tokyo Narita

Wed 2/11

11:25 am-3:20 pm

Nonstop4h 55m

₱11,246

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Sat 4/18

4:35 am-10:10 am

Nonstop4h 35m

Tokyo Narita

Wed 4/22

11:10 am-2:50 pm

Nonstop4h 40m

₱11,600

ManilaOsaka

MNL - KIX

MNLKIX

Manila Ninoy Aquino Intl

Thu 1/15

2:40 am-7:25 am

Nonstop3h 45m

Osaka Kansai Intl

Tue 1/20

10:00 pm-1:40 am

Nonstop4h 40m

₱12,424

ManilaOsaka

MNL - KIX

MNLKIX

Manila Ninoy Aquino Intl

Thu 1/15

2:40 am-7:25 am

Nonstop3h 45m

Osaka Kansai Intl

Wed 1/21

10:00 pm-1:40 am

Nonstop4h 40m

₱12,424

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Sun 12/7

12:50 am-6:05 am

Nonstop4h 15m

Tokyo Narita

Thu 12/11

7:10 pm-11:30 pm

Nonstop5h 20m

₱12,777

Flights are sorted by cheapest round-trip flights first.

Deals found on 11/5

Showing 1-10 of 60 results
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Best time to book a flight from Manila to Japan

Have a flexible travel schedule? Discover the best time to fly to Japan from Manila with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Manila to Japan

What is the cheapest month to book a flight from Manila to Japan?

Currently, August is the cheapest month in which you can book a flight from Manila to Japan (average of ₱4,475). Flying from Manila to Japan in December is currently the most expensive (average of ₱10,010). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from MNL to JP?

Find hourly flight availability from Manila to Japan. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated November 7, 2025.

A simple way to save on the total cost of your ticket is to fly from Manila to Japan in the morning. If you’re flexible enough to do this you can expect to save up to 12% on your trip compared to booking a flight at noon.

What is the cheapest day to fly from Manila to Japan?

Use this chart to determine the cheapest time to fly round-trip from Manila to Japan. Price data was last updated on November 2, 2025.

Travelers seeking maximum savings on their Manila to Japan flight should consider departing on Saturday afternoons when fares are most often at their lowest. Thursday at noon flights should be avoided if possible as fares are typically the most expensive at this time.

Weekly flight availability from Manila to Japan

Explore weekly flight availability from Manila to Japan. Discover flights operating on different days of the week, giving you the flexibility to choose a travel day that best fits your plans. Compare info to find the most convenient option for your journey. Data last updated November 7, 2025.

The most flights from MNL to JP0 are scheduled on a Monday (3 on average). You will have fewer flight options on Monday, which is when the least amount of flights are scheduled (3 on average).

Reviews of airlines servicing Japan

Get insights into the airlines that provide service to Japan. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Japan. Reviews last updated November 7, 2025.
Peruse reviews from past customers who have flown with ZIPAIR, Philippine Airlines, and Cebu Pacific from Manila to Japan to help guide your decision. You can also see how each airline stacks up in terms of entertainment options, comfort, food, crew/service, and boarding process.
ZIPAIR
7.4
Good
52 reviews
Check prices

Comfort

7.4

Food

5.8

Crew

7.5

Boarding

7.5

Entertainment

5.2

Overall

7.4

Reviews

1 / 2
8.0
Excellent

Angela,Jun 2024

INL - ICN

Quick 2 ½ hr flight with mo frills flight. It was good.
ZIPAIR
7.4
Good
52 reviews
ZIPAIR
7.4
Good
52 reviews
Check prices

Comfort

7.4

Food

5.8

Crew

7.5

Boarding

7.5

Entertainment

5.2

Overall

7.4

Reviews

1 / 2
8.0
Excellent

Angela,Jun 2024

INL - ICN

Quick 2 ½ hr flight with mo frills flight. It was good.
Philippine Airlines
7.3
Good
934 reviews
ZIPAIR
7.4
Good
52 reviews
Check prices

Comfort

7.4

Food

5.8

Crew

7.5

Boarding

7.5

Entertainment

5.2

Overall

7.4

Reviews

1 / 2
8.0
Excellent

Angela,Jun 2024

INL - ICN

Quick 2 ½ hr flight with mo frills flight. It was good.
Cebu Pacific
6.8
Okay
202 reviews
ZIPAIR
7.4
Good
52 reviews
Check prices

Comfort

7.4

Food

5.8

Crew

7.5

Boarding

7.5

Entertainment

5.2

Overall

7.4

Reviews

1 / 2
8.0
Excellent

Angela,Jun 2024

INL - ICN

Quick 2 ½ hr flight with mo frills flight. It was good.
Philippines AirAsia
6.6
Okay
114 reviews
ZIPAIR
7.4
Good
52 reviews
Check prices

Comfort

7.4

Food

5.8

Crew

7.5

Boarding

7.5

Entertainment

5.2

Overall

7.4

Reviews

1 / 2
8.0
Excellent

Angela,Jun 2024

INL - ICN

Quick 2 ½ hr flight with mo frills flight. It was good.

Related info for your journey

Find useful and relevant information for your journey from Manila to Japan. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly from for flights from Manila to Japan?

    If you book a flight to Japan from Manila, you will be flying from Ninoy Aquino Intl, which is the city’s only airport. Manila Ninoy Aquino Intl (MNL) is located 10.9 km from the center of Manila.

  • How popular is this Manila to Japan flight route?

    Within the past month, 5,201 users have taken a look at flights from Manila Ninoy Aquino Intl to Japan.

  • How long is the flight from Manila to Japan?

    Departing from Manila to Japan will take you 3h 45m. The distance between Manila and Japan is about 2634 km. When browsing for deals, the options you’ll see will be for both direct flights and flights with stops.

  • What are the cheapest airlines to fly from Manila to Japan one-way?

    The cheapest airlines for a one-way flight from Manila to Japan are Cebu Pacific (₱3,886), Philippines AirAsia (₱4,475), and Jetstar Japan (₱4,652).

  • What are the most popular routes from Manila to Japan?

    The most popular flight routes from Manila to Japan are Manila Ninoy Aquino Intl - Tokyo Haneda, Manila Ninoy Aquino Intl - Tokyo Narita and Manila Ninoy Aquino Intl - Osaka Kansai Intl.

  • What are the most reliable airlines from Manila to Japan?

    Before booking your flight to Japan from Manila, check out the most reliable airlines to get you to your destination on time: Philippine Airlines (93%), ANA (93%), Cebu Pacific( 89%).

  • What are the cheapest flights from Manila to Japan?

    Looking at all options, your cheapest flight can be booked for ₱2,193. While the most popular route (Manila Ninoy Aquino Intl - Tokyo Haneda) can be booked for ₱14,661 on average, our data indicates ₱8,873 when flying from Manila to Japan.

  • Can I find deals for flights from Manila to Japan that include hotel bookings?

    Yes. In addition to deals on Manila to Japan flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Manila to Japan?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Manila to Japan.

  • Can I find deals for business class flights from Manila to Japan?

    Yes. Cheapflights offers flight deals from Manila to Japan by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Manila to Japan?

    Currently, August is the cheapest month in which you can book a flight from Manila to Japan (average of ₱4,475). Flying from Manila to Japan in December is currently the most expensive (average of ₱10,010). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

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Alternative routes for Manila to Japan

See prices for flight routes from nearby airports that may be better suited for you.
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Top 10 airlines flying from Manila to Japan

Discover the top 10 airlines that operate flights from Manila to Japan. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated November 7, 2025.
AirlineCheapestAverageFlexibilityOn-time
Jetstar JapanCheapest₱6,920Average₱14,090FlexibilityNo cancel feeOn-timeN/A
Search Jetstar Japan flights
HK ExpressCheapest₱7,204Average₱15,368FlexibilityNo cancel feeOn-time90%
Search HK Express flights
Cebu PacificCheapest₱7,844Average₱15,703FlexibilityNo cancel feeOn-time64%
Search Cebu Pacific flights
Philippines AirAsiaCheapest₱8,387Average₱12,367FlexibilityNo cancel feeOn-time53%
Search Philippines AirAsia flights
Jetstar AsiaCheapest₱9,722Average₱13,895FlexibilityNo cancel feeOn-time86%
Search Jetstar Asia flights
ZIPAIRCheapest₱9,805Average₱17,989FlexibilityNo cancel feeOn-timeN/A
Search ZIPAIR flights
Philippine AirlinesCheapest₱11,567Average₱22,239FlexibilityNo cancel feeOn-time60%
Search Philippine Airlines flights
Asiana AirlinesCheapest₱12,565Average₱23,942FlexibilityNo cancel feeOn-time76%
Search Asiana Airlines flights
Cathay PacificCheapest₱12,729Average₱18,395FlexibilityNo cancel feeOn-time72%
Search Cathay Pacific flights
Greater Bay AirlinesCheapest₱12,957Average₱20,255FlexibilityNo cancel feeOn-timeN/A
Search Greater Bay Airlines flights

Fly with Cheapflights

Find the best flight deals on Cheapflights, where travelers can enjoy low prices and a wide availability of flights to their desired destinations.

How does Cheapflights help users find flights from Manila to Japan?

Cheapflights helps you search for flights from Manila to Japan via 900+ travel sites so you don’t have to. After performing a flight search, users can also filter their flight selection by filtering for price, number of stops, airlines, and so on.

Why should you use Cheapflights to find cheap flight tickets from Manila to Japan?

Cheapflights taps into our reliable network of hundreds of airlines and travel agencies to find the best deals for flights from Manila to Japan for you. Better yet — we are completely free to use.

Can Cheapflights find flights from Manila to Japan with no change fees?

Need flexible booking options for your flight to Japan from Manila? Don’t worry, Cheapflights have you covered. Use our search filter to only show flights with no change fees.

Can Cheapflights notify me if prices for flights from Manila to Japan become cheaper?

Of course! You can now track prices for flights from Manila to Japan and get an alert from Cheapflights when they change. Have a valid email address ready and click the bell icon next to the flight deals above to set up your price alerts.

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