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Cheap flights from Manila to Borneo from ₱5,048

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 5/16. Fares are subject to change and may not be available on all flights or dates of travel.
MNL — BKI
May 30 — Jun 61
1 adult
1 adult, Economy, 0 bags

Cheap flight deals from Manila to Borneo

Enter your travel dates to find the best prices.

Cheapest flights from Manila to Borneo
Explore the most affordable flight options available from Manila to Borneo. Find the lowest fares from popular airlines and budget airlines, with prices last updated on April 30, 2026.

Tue 5/127:50 pm
MNL
-
BWN
Nonstop2h 20m
Cebu Pacific
Thu 5/1411:05 pm
BWN
-
MNL
Nonstop2h 25m
Cebu Pacific
Deal found 4/28₱9,173
Thu 6/117:50 pm
MNL
-
BWN
Nonstop2h 20m
Cebu Pacific
Sat 6/1311:05 pm
BWN
-
MNL
Nonstop2h 25m
Cebu Pacific
Deal found 4/28₱9,727
Mon 11/24:15 pm
MNL
-
BKI
Nonstop2h 15m
Philippines AirAsia
Fri 11/66:55 pm
BKI
-
MNL
Nonstop2h 00m
Philippines AirAsia
Deal found 4/29₱10,836
Fri 6/2611:10 pm
MNL
-
BKI
Nonstop2h 10m
Philippines AirAsia
Sun 6/281:45 am
BKI
-
MNL
Nonstop2h 10m
Philippines AirAsia
Deal found 4/29₱11,205
Wed 6/1711:10 pm
MNL
-
BKI
Nonstop2h 10m
Philippines AirAsia
Sun 6/281:45 am
BKI
-
MNL
Nonstop2h 10m
Philippines AirAsia
Deal found 4/29₱11,390
Wed 7/811:10 pm
MNL
-
BKI
Nonstop2h 10m
Philippines AirAsia
Sun 7/121:45 am
BKI
-
MNL
Nonstop2h 10m
Philippines AirAsia
Deal found 4/28₱11,698
Sat 7/187:50 pm
MNL
-
BWN
Nonstop2h 20m
Cebu Pacific
Tue 7/2111:05 pm
BWN
-
MNL
Nonstop2h 25m
Cebu Pacific
Deal found 4/26₱11,759
Sat 9/197:50 pm
MNL
-
BWN
Nonstop2h 20m
Cebu Pacific
Thu 9/2411:05 pm
BWN
-
MNL
Nonstop2h 25m
Cebu Pacific
Deal found 4/28₱11,882
Wed 6/1011:10 pm
MNL
-
BKI
Nonstop2h 10m
Philippines AirAsia
Sun 6/141:45 am
BKI
-
MNL
Nonstop2h 10m
Philippines AirAsia
Deal found 4/28₱12,190
Tue 11/107:50 pm
MNL
-
BWN
Nonstop2h 20m
Cebu Pacific
Thu 11/1211:05 pm
BWN
-
MNL
Nonstop2h 25m
Cebu Pacific
Deal found 4/28₱12,190
Sun 7/1911:10 pm
MNL
-
BKI
Nonstop2h 10m
Philippines AirAsia
Sun 7/261:45 am
BKI
-
MNL
Nonstop2h 10m
Philippines AirAsia
Deal found 4/29₱12,252
Tue 8/117:50 pm
MNL
-
BWN
Nonstop2h 20m
Cebu Pacific
Thu 8/1311:05 pm
BWN
-
MNL
Nonstop2h 25m
Cebu Pacific
Deal found 4/28₱12,436

Find flight deals from Manila to Borneo

Keep the following information in mind while searching for Manila to Borneo flight deals. Data was last updated April 30, 2026.

Round-trip from

₱9,173

One-way from

₱5,048

Popular in

December

Cheapest in

July

Average price

₱6,464
Cebu Pacific
  • Cebu Pacific
  • 5/12-5/14
  • Nonstop
  • 4h 45m total
  • Manila to Borneo
Search Deals
Cebu Pacific
  • Cebu Pacific
  • 5/16
  • Nonstop
  • 2h 20m total
  • Manila to Borneo
Search Deals
Highest demand for flights based on searches. 13% potential increase in price (₱65,657 potential increase over avg. RT price).
Search Deals
Cheapest flight prices on average. 2% potential price decrease (₱11,423 potential savings vs. average RT price).
Search Deals
Average for round-trip flights in April 2026
Search Deals

Cheapflights Fare Finder

 
Customize your flight search to find flights from Manila to Borneo that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated April 30, 2026.
Use the filters below to find and compare flights from Manila to Borneo that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

Cheapest round-trip

ManilaBandar Seri Begawan

MNL - BWN

MNLBWN

Manila Ninoy Aquino Intl

Tue 5/12

7:50 pm-10:10 pm

Nonstop2h 20m

Bandar Seri Begawan Brunei Intl

Thu 5/14

11:05 pm-1:30 am

Nonstop2h 25m

₱9,173

ManilaBandar Seri Begawan

MNL - BWN

MNLBWN

Manila Ninoy Aquino Intl

Thu 6/11

7:50 pm-10:10 pm

Nonstop2h 20m

Bandar Seri Begawan Brunei Intl

Sat 6/13

11:05 pm-1:30 am

Nonstop2h 25m

₱9,727
Quickest round-trip

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Fri 6/26

11:10 pm-1:20 am

Nonstop2h 10m

Kota Kinabalu

Sun 6/28

1:45 am-3:55 am

Nonstop2h 10m

₱11,205

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Wed 6/17

11:10 pm-1:20 am

Nonstop2h 10m

Kota Kinabalu

Sun 6/28

1:45 am-3:55 am

Nonstop2h 10m

₱11,390

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Sun 7/19

11:10 pm-1:20 am

Nonstop2h 10m

Kota Kinabalu

Sun 7/26

1:45 am-3:55 am

Nonstop2h 10m

₱12,313

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Wed 8/5

11:10 pm-1:20 am

Nonstop2h 10m

Kota Kinabalu

Wed 8/12

1:45 am-3:55 am

Nonstop2h 10m

₱12,867

ManilaKuching

MNL - KCH

MNLKCH

Manila Ninoy Aquino Intl

Tue 6/9

7:40 pm-9:30 pm

1 stop25h 50m

Kuching

Tue 6/16

10:15 pm-5:50 am

1 stop7h 35m

₱13,114

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Mon 6/1

11:10 pm-1:20 am

Nonstop2h 10m

Kota Kinabalu

Sun 6/7

1:45 am-3:55 am

Nonstop2h 10m

₱13,483

ManilaKuching

MNL - KCH

MNLKCH

Manila Ninoy Aquino Intl

Sun 6/14

6:55 am-9:30 pm

1 stop14h 35m

Kuching

Sun 6/21

10:15 pm-5:50 am

1 stop7h 35m

₱14,037

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Mon 6/1

11:10 pm-1:20 am

Nonstop2h 10m

Kota Kinabalu

Wed 6/3

1:45 am-3:55 am

Nonstop2h 10m

₱14,468

Flights are sorted by cheapest round-trip flights first.

Deals found on 4/29

Showing 1-10 of 53 resultsSorted by cheapest first
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6

Best time to book a flight from Manila to Borneo

Have a flexible travel schedule? Discover the best time to fly to Borneo from Manila with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Manila to Borneo

How far ahead should I book a flight from Manila to Borneo?

To ensure you get the cheapest price possible for a flight from Manila to Borneo, you should look to book at least 65 days in advance of your intended travel date. The price of your flight may increase if you delay and leave booking until a week or so before departure.

What is the cheapest month to book a flight from Manila to Borneo?

Currently, April is the cheapest month in which you can book a flight from Manila to Borneo (average of ₱1,970). Flying from Manila to Borneo in March is currently the most expensive (average of ₱5,110). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from MNL to KVK?

Find hourly flight availability from Manila to Borneo. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated April 30, 2026.

When flying from Manila to Borneo, the time of day you decide to fly out makes little to no difference towards the overall price you’ll pay on tickets.

Reviews of airlines servicing Borneo

Get insights into the airlines that provide service to Borneo. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Borneo. Reviews last updated April 30, 2026.
Read reviews from past customers who have flown Malaysia Airlines,Cebu Pacific, andPhilippines AirAsia from Manila to Borneo. You can also see how each airline compares in terms of entertainment options, comfort, food, crew/service, and boarding process.
Malaysia Airlines
7.4
Good
307 reviews
Check prices

Comfort

7.5

Entertainment

6.7

Food

7.0

Crew

8.1

Overall

7.4

Boarding

7.6

Reviews

1 / 20
6.0
Good

Sandeep,Dec 2025

SYD - KUL

Food was really good. My entertainment screen wasn’t working and the crew couldn’t help despite repeated restarts. I would have appreciated a voucher to use for next time or inflight shopping.
Malaysia Airlines
7.4
Good
307 reviews
Malaysia Airlines
7.4
Good
307 reviews
Check prices

Comfort

7.5

Entertainment

6.7

Food

7.0

Crew

8.1

Overall

7.4

Boarding

7.6

Reviews

1 / 20
6.0
Good

Sandeep,Dec 2025

SYD - KUL

Food was really good. My entertainment screen wasn’t working and the crew couldn’t help despite repeated restarts. I would have appreciated a voucher to use for next time or inflight shopping.
Cebu Pacific
6.8
Okay
216 reviews
Malaysia Airlines
7.4
Good
307 reviews
Check prices

Comfort

7.5

Entertainment

6.7

Food

7.0

Crew

8.1

Overall

7.4

Boarding

7.6

Reviews

1 / 20
6.0
Good

Sandeep,Dec 2025

SYD - KUL

Food was really good. My entertainment screen wasn’t working and the crew couldn’t help despite repeated restarts. I would have appreciated a voucher to use for next time or inflight shopping.
Philippines AirAsia
6.8
Okay
126 reviews
Malaysia Airlines
7.4
Good
307 reviews
Check prices

Comfort

7.5

Entertainment

6.7

Food

7.0

Crew

8.1

Overall

7.4

Boarding

7.6

Reviews

1 / 20
6.0
Good

Sandeep,Dec 2025

SYD - KUL

Food was really good. My entertainment screen wasn’t working and the crew couldn’t help despite repeated restarts. I would have appreciated a voucher to use for next time or inflight shopping.
Scoot
6.7
Okay
326 reviews
Malaysia Airlines
7.4
Good
307 reviews
Check prices

Comfort

7.5

Entertainment

6.7

Food

7.0

Crew

8.1

Overall

7.4

Boarding

7.6

Reviews

1 / 20
6.0
Good

Sandeep,Dec 2025

SYD - KUL

Food was really good. My entertainment screen wasn’t working and the crew couldn’t help despite repeated restarts. I would have appreciated a voucher to use for next time or inflight shopping.

Related info for your journey

Find useful and relevant information for your journey from Manila to Borneo. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly from for flights from Manila to Borneo?

    Manila Ninoy Aquino Intl (MNL), located 10.9 km from the city center, is the airport you fly out of when you book flights from Manila to Borneo.

  • How popular is this Manila to Borneo flight route?

    Flights from Manila Ninoy Aquino Intl to Borneo have been viewed 862 times in the past calendar month.

  • How long is the flight from Manila to Borneo?

    For as low as ₱11,205, Cebu Pacific can have you in Borneo from Manila in 2h 10m. The distance between Manila and Borneo is about 1096 km. When browsing for deals, the options you’ll see will be for both direct flights and flights with stops.

  • What are the cheapest airlines to fly from Manila to Borneo one-way?

    ₱2,297 is the cheapest one-way deal found within the past few days, from Philippines AirAsia. You may also be able to find cheap deals on Cebu Pacific and Royal Brunei Airlines, with prices starting from ₱2,782 and ₱6,634, respectively.

  • What are the most popular routes from Manila to Borneo?

    The most popular route from Manila to Borneo is Manila Ninoy Aquino Intl - Kota Kinabalu. You may also consider Manila Ninoy Aquino Intl - Bandar Seri Begawan Brunei Intl or Manila Ninoy Aquino Intl - Kuching.

  • What are the cheapest flights from Manila to Borneo?

    Looking at all options, your cheapest flight can be booked for ₱3,611. While the most popular route (Manila Ninoy Aquino Intl - Kota Kinabalu) can be booked for ₱12,252 on average, our data indicates ₱5,863 when flying from Manila to Borneo.

  • Can I find deals for flights from Manila to Borneo that include hotel bookings?

    Yes. In addition to deals on Manila to Borneo flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Manila to Borneo?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Manila to Borneo.

  • Can I find deals for business class flights from Manila to Borneo?

    Yes. Cheapflights offers flight deals from Manila to Borneo by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Manila to Borneo?

    Currently, April is the cheapest month in which you can book a flight from Manila to Borneo (average of ₱1,970). Flying from Manila to Borneo in March is currently the most expensive (average of ₱5,110). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

Toggle through the tabs below to find thousands of options on Cheapflights for your next trip.

Top 6 airlines flying from Manila to Borneo

Discover the top 6 airlines that operate flights from Manila to Borneo. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated April 30, 2026.
AirlineCheapestAverageFlexibilityOn-time
Philippines AirAsiaCheapest₱4,563Average₱6,360FlexibilityNo cancel feeOn-time53%
Search Philippines AirAsia flights
Malaysia AirlinesCheapest₱5,231Average₱19,460FlexibilityNo cancel feeOn-time67%
Search Malaysia Airlines flights
Cebu PacificCheapest₱5,872Average₱9,815FlexibilityNo cancel feeOn-time64%
Search Cebu Pacific flights
ScootCheapest₱8,753Average₱9,838FlexibilityNo cancel feeOn-timeN/A
Search Scoot flights
Royal Brunei AirlinesCheapest₱10,493Average₱16,608FlexibilityNo cancel feeOn-time84%
Search Royal Brunei Airlines flights
AirAsiaCheapest₱10,595Average₱15,520FlexibilityNo cancel feeOn-time66%
Search AirAsia flights

Fly with Cheapflights

Find the best flight deals on Cheapflights, where travelers can enjoy low prices and a wide availability of flights to their desired destinations.

How does Cheapflights help users find flights from Manila to Borneo?

900+ travel sites are searched through when a user searches for a flight using Cheapflights. From the search interface, users can use filters to choose airlines, airports, flight times, cabin classes and more to their preference. Book your flight to Borneo from Manila today with Cheapflights!

Why should you use Cheapflights to find cheap flight tickets from Manila to Borneo?

By finding flights from multiple airlines and providers at completely no cost, Cheapflights helps millions of users like you annually find the best flights to Borneo from Manila.

Can Cheapflights find flights from Manila to Borneo with no change fees?

Yes, we can. To see specific flights from Manila to Borneo with no change fees, users can toggle flexible booking options after using the search form above to find flights.

Can Cheapflights notify me if prices for flights from Manila to Borneo become cheaper?

Yes! Start tracking prices for Manila to Borneo flights today and get alerted whenever prices for these flights change. To access this feature, click the bell icon next to the flight deals above, which will prompt you for a valid email address to receive your alerts.

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