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Cheap flights from Manila to Borneo from ₱2,989

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 11/28. Fares are subject to change and may not be available on all flights or dates of travel.
MNL — BKI
Dec 4 — Dec 111
1 adult
1 adult, Economy, 0 bags

Find flight deals from Manila to Borneo

Enter your travel dates to find the best prices.

Cheapest flights from Manila to Borneo
Explore the most affordable flight options available from Manila to Borneo. Find the lowest fares from popular airlines and budget airlines, with prices last updated on November 4, 2025.

Fri 11/214:15 pmMNL - BKI
Nonstop2h 15mPhilippines AirAsia
Wed 11/266:55 pmBKI - MNL
Nonstop2h 00mPhilippines AirAsia
Deal found 11/3₱5,977
Fri 11/284:15 pmMNL - BKI
Nonstop2h 15mPhilippines AirAsia
Fri 12/56:55 pmBKI - MNL
Nonstop2h 00mPhilippines AirAsia
Deal found 11/4₱6,329
Wed 11/264:15 pmMNL - BKI
Nonstop2h 15mPhilippines AirAsia
Sun 11/306:55 pmBKI - MNL
Nonstop2h 00mPhilippines AirAsia
Deal found 11/2₱6,973
Fri 12/54:15 pmMNL - BKI
Nonstop2h 15mPhilippines AirAsia
Fri 12/126:55 pmBKI - MNL
Nonstop2h 00mPhilippines AirAsia
Deal found 11/4₱7,677
Sun 12/74:15 pmMNL - BKI
Nonstop2h 15mPhilippines AirAsia
Sun 12/146:55 pmBKI - MNL
Nonstop2h 00mPhilippines AirAsia
Deal found 11/4₱8,263
Fri 11/284:15 pmMNL - BKI
Nonstop2h 15mMultiple Airlines
Thu 12/41:30 amBKI - MNL
1 stop23h 50mMultiple Airlines
Deal found 11/4₱10,548
Fri 11/284:15 pmMNL - BKI
Nonstop2h 15mMultiple Airlines
Wed 12/31:30 amBKI - MNL
1 stop18h 10mMultiple Airlines
Deal found 11/4₱10,724
Thu 11/69:40 pmMNL - BWN
Nonstop2h 05mRoyal Brunei Airlines
Mon 11/106:35 pmBWN - MNL
Nonstop2h 10mRoyal Brunei Airlines
Deal found 11/4₱10,724
Fri 12/54:15 pmMNL - BKI
Nonstop2h 15mMultiple Airlines
Thu 12/111:05 pmBKI - MNL
2 stops12h 05mMultiple Airlines
Deal found 11/4₱10,899
Fri 12/54:15 pmMNL - BKI
Nonstop2h 15mMultiple Airlines
Sat 12/1310:00 amBKI - MNL
2 stops15h 10mMultiple Airlines
Deal found 11/4₱11,192
Fri 11/219:30 pmMNL - BKI
1 stop11h 10mMultiple Airlines
Wed 11/266:55 pmBKI - MNL
Nonstop2h 00mMultiple Airlines
Deal found 11/3₱11,368
Fri 11/219:30 pmMNL - BKI
1 stop11h 10mMultiple Airlines
Sun 11/236:55 pmBKI - MNL
Nonstop2h 00mMultiple Airlines
Deal found 11/4₱11,661

Cheap flight deals from Manila to Borneo

Keep the following information in mind while searching for Manila to Borneo flight deals. Data was last updated November 4, 2025.

Round-trip from

₱5,860

One-way from

₱2,989

Popular in

January

Cheapest in

July

Average price

₱6,329
Philippines AirAsia
  • Philippines AirAsia
  • 1/16-1/21
  • Nonstop
  • 4h 15m total
  • Manila to Borneo
Search Deals
Philippines AirAsia
  • Philippines AirAsia
  • 11/28
  • Nonstop
  • 2h 15m total
  • Manila to Borneo
Search Deals
Highest demand for flights based on searches. 16% potential increase in price (₱74,645 potential increase over avg. RT price).
Search Deals
Cheapest flight prices on average. 1% potential price decrease (₱7,453 potential savings vs. average RT price).
Search Deals
Average for round-trip flights in November 2025
Search Deals

Cheapflights Fare Finder

 
Customize your flight search to find flights from Manila to Borneo that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated November 4, 2025.
Use the filters below to find and compare flights from Manila to Borneo that are best for you.

Fly from

Manila

Fly to

Borneo

Route

Depart

Return

Price

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Wed 1/21

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Fri 1/30

6:55 pm-8:55 pm

Nonstop2h 00m

₱6,153

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Wed 11/26

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Sun 11/30

6:55 pm-8:55 pm

Nonstop2h 00m

₱7,208

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Wed 12/17

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Wed 12/24

6:55 pm-8:55 pm

Nonstop2h 00m

₱8,614

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Fri 11/21

6:50 am-5:00 pm

1 stop10h 10m

Kota Kinabalu

Sun 11/23

6:55 pm-8:55 pm

Nonstop2h 00m

₱10,196

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Fri 1/16

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Tue 1/20

3:55 pm-12:35 am

1 stop8h 40m

₱11,192

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Fri 11/21

9:30 pm-8:40 am

1 stop11h 10m

Kota Kinabalu

Wed 11/26

6:55 pm-8:55 pm

Nonstop2h 00m

₱11,368

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Fri 12/5

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Fri 12/12

1:05 pm-11:55 pm

2 stops10h 50m

₱11,661

ManilaKuching

MNL - KCH

MNLKCH

Manila Ninoy Aquino Intl

Mon 11/17

4:15 pm-9:10 am

1 stop16h 55m

Kuching

Thu 11/20

10:05 pm-8:55 pm

1 stop22h 50m

₱12,364

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Fri 11/28

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Thu 12/4

6:00 am-1:10 am

2 stops19h 10m

₱12,364

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Thu 11/27

2:05 am-3:55 pm

1 stop13h 50m

Kota Kinabalu

Fri 12/5

6:55 pm-8:55 pm

Nonstop2h 00m

₱12,423

Flights are sorted by cheapest round-trip flights first.

Deals found on 11/2

Showing 1-10 of 60 results
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Best time to book a flight from Manila to Borneo

Have a flexible travel schedule? Discover the best time to fly to Borneo from Manila with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Manila to Borneo

What is the cheapest month to book a flight from Manila to Borneo?

Currently, September is the cheapest month in which you can book a flight from Manila to Borneo (average of ₱4,043). Flying from Manila to Borneo in January is currently the most expensive (average of ₱5,450). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from MNL to KVK?

Find hourly flight availability from Manila to Borneo. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated November 4, 2025.

It’s optimal to fly from Manila to Borneo at noon. By choosing this option you can save up to 38% on the cost of your flight, compared to a flight in the morning.

What is the cheapest day to fly from Manila to Borneo?

Use this chart to determine the cheapest time to fly round-trip from Manila to Borneo. Price data was last updated on February 16, 2025.

Travelers seeking maximum savings on their Manila to Borneo flight should consider departing on Sunday evenings when fares are most often at their lowest. Thursday at noon flights should be avoided if possible as fares are typically the most expensive at this time.

Reviews of airlines servicing Borneo

Get insights into the airlines that provide service to Borneo. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Borneo. Reviews last updated November 4, 2025.
Read reviews from past customers who have flown Malaysia Airlines, Cebu Pacific, and Scoot from Manila to Borneo. You can also see how each airline compares in terms of entertainment options, comfort, food, crew/service, and boarding process.
Malaysia Airlines
7.3
Good
278 reviews
Check prices

Boarding

7.6

Comfort

7.4

Crew

8.1

Entertainment

6.7

Food

7.0

Overall

7.3

Reviews

1 / 20
8.0
Excellent

Anjan,Nov 2024

SYD - KUL

I have a good experience and got good hospitality from cabin crew thank you.
Malaysia Airlines
7.3
Good
278 reviews
Malaysia Airlines
7.3
Good
278 reviews
Check prices

Boarding

7.6

Comfort

7.4

Crew

8.1

Entertainment

6.7

Food

7.0

Overall

7.3

Reviews

1 / 20
8.0
Excellent

Anjan,Nov 2024

SYD - KUL

I have a good experience and got good hospitality from cabin crew thank you.
Cebu Pacific
6.8
Okay
202 reviews
Malaysia Airlines
7.3
Good
278 reviews
Check prices

Boarding

7.6

Comfort

7.4

Crew

8.1

Entertainment

6.7

Food

7.0

Overall

7.3

Reviews

1 / 20
8.0
Excellent

Anjan,Nov 2024

SYD - KUL

I have a good experience and got good hospitality from cabin crew thank you.
Scoot
6.7
Okay
309 reviews
Malaysia Airlines
7.3
Good
278 reviews
Check prices

Boarding

7.6

Comfort

7.4

Crew

8.1

Entertainment

6.7

Food

7.0

Overall

7.3

Reviews

1 / 20
8.0
Excellent

Anjan,Nov 2024

SYD - KUL

I have a good experience and got good hospitality from cabin crew thank you.
Philippines AirAsia
6.6
Okay
114 reviews
Malaysia Airlines
7.3
Good
278 reviews
Check prices

Boarding

7.6

Comfort

7.4

Crew

8.1

Entertainment

6.7

Food

7.0

Overall

7.3

Reviews

1 / 20
8.0
Excellent

Anjan,Nov 2024

SYD - KUL

I have a good experience and got good hospitality from cabin crew thank you.

Related info for your journey

Find useful and relevant information for your journey from Manila to Borneo. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly from for flights from Manila to Borneo?

    Manila Ninoy Aquino Intl (MNL), located 10.9 km from the city center, is the airport you fly out of when you book flights from Manila to Borneo.

  • How popular is this Manila to Borneo flight route?

    Flights from Manila Ninoy Aquino Intl to Borneo have been viewed 1,301 times in the past calendar month.

  • How long is the flight from Manila to Borneo?

    For as low as ₱6,153, Philippines AirAsia can have you in Borneo from Manila in 2h 15m. The distance between Manila and Borneo is about 1096 km. When browsing for deals, the options you’ll see will be for both direct flights and flights with stops.

  • What are the cheapest airlines to fly from Manila to Borneo one-way?

    ₱2,989 is the cheapest one-way deal found within the past few days, from Philippines AirAsia. You may also be able to find cheap deals on Cebu Pacific and AirAsia, with prices starting from ₱5,098 and ₱6,505, respectively.

  • What are the most popular routes from Manila to Borneo?

    The most popular route from Manila to Borneo is Manila Ninoy Aquino Intl - Bandar Seri Begawan Brunei Intl. You may also consider Manila Ninoy Aquino Intl - Kota Kinabalu or Manila Ninoy Aquino Intl - Kuching.

  • What are the cheapest flights from Manila to Borneo?

    Looking at all options, your cheapest flight can be booked for ₱3,094. While the most popular route (Manila Ninoy Aquino Intl - Bandar Seri Begawan Brunei Intl) can be booked for ₱12,071 on average, our data indicates ₱5,103 when flying from Manila to Borneo.

  • Can I find deals for flights from Manila to Borneo that include hotel bookings?

    Yes. In addition to deals on Manila to Borneo flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Manila to Borneo?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Manila to Borneo.

  • Can I find deals for business class flights from Manila to Borneo?

    Yes. Cheapflights offers flight deals from Manila to Borneo by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Manila to Borneo?

    Currently, September is the cheapest month in which you can book a flight from Manila to Borneo (average of ₱4,043). Flying from Manila to Borneo in January is currently the most expensive (average of ₱5,450). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

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Alternative routes for Manila to Borneo

See prices for flight routes from nearby airports that may be better suited for you.
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Top 8 airlines flying from Manila to Borneo

Discover the top 8 airlines that operate flights from Manila to Borneo. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated November 4, 2025.
AirlineCheapestAverageFlexibilityOn-time
Philippines AirAsiaCheapest₱4,390Average₱6,478FlexibilityNo cancel feeOn-time53%
Search Philippines AirAsia flights
Cebu PacificCheapest₱5,548Average₱8,020FlexibilityNo cancel feeOn-time64%
Search Cebu Pacific flights
ScootCheapest₱7,760Average₱9,892FlexibilityNo cancel feeOn-timeN/A
Search Scoot flights
AirAsiaCheapest₱10,085Average₱14,592FlexibilityNo cancel feeOn-time66%
Search AirAsia flights
Royal Brunei AirlinesCheapest₱10,288Average₱15,673FlexibilityNo cancel feeOn-time84%
Search Royal Brunei Airlines flights
Malaysia AirlinesCheapest₱16,982Average₱19,463FlexibilityNo cancel feeOn-time67%
Search Malaysia Airlines flights
Singapore AirlinesCheapest₱19,485Average₱24,809FlexibilityNo cancel feeOn-time81%
Search Singapore Airlines flights
Philippine AirlinesCheapest₱24,422Average₱27,192FlexibilityNo cancel feeOn-time60%
Search Philippine Airlines flights

Fly with Cheapflights

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How does Cheapflights help users find flights from Manila to Borneo?

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Why should you use Cheapflights to find cheap flight tickets from Manila to Borneo?

By finding flights from multiple airlines and providers at completely no cost, Cheapflights helps millions of users like you annually find the best flights to Borneo from Manila.

Can Cheapflights find flights from Manila to Borneo with no change fees?

Yes, we can. To see specific flights from Manila to Borneo with no change fees, users can toggle flexible booking options after using the search form above to find flights.

Can Cheapflights notify me if prices for flights from Manila to Borneo become cheaper?

Yes! Start tracking prices for Manila to Borneo flights today and get alerted whenever prices for these flights change. To access this feature, click the bell icon next to the flight deals above, which will prompt you for a valid email address to receive your alerts.

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