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Cheap flights from Manila to Borneo from ₱2,721

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 6/21. Fares are subject to change and may not be available on all flights or dates of travel.
MNL — BKI
Mar 24 — Mar 311
1 adult
1 adult, Economy, 0 bags

Cheap flight deals from Manila to Borneo

Enter your travel dates to find the best prices.

Cheapest flights from Manila to Borneo
Explore the most affordable flight options available from Manila to Borneo. Find the lowest fares from popular airlines and budget airlines, with prices last updated on February 22, 2026.

Mon 4/611:10 pm
MNL
-
BKI
Nonstop2h 10m
Philippines AirAsia
Sun 4/121:45 am
BKI
-
MNL
Nonstop2h 10m
Philippines AirAsia
Deal found 2/20₱5,905
Fri 4/1011:10 pm
MNL
-
BKI
Nonstop2h 10m
Philippines AirAsia
Sun 4/121:45 am
BKI
-
MNL
Nonstop2h 10m
Philippines AirAsia
Deal found 2/19₱5,963
Mon 8/1011:10 pm
MNL
-
BKI
Nonstop2h 10m
Philippines AirAsia
Wed 8/121:45 am
BKI
-
MNL
Nonstop2h 10m
Philippines AirAsia
Deal found 2/20₱6,021
Fri 3/274:15 pm
MNL
-
BKI
Nonstop2h 15m
Philippines AirAsia
Sun 3/291:45 am
BKI
-
MNL
Nonstop2h 10m
Philippines AirAsia
Deal found 2/19₱7,584
Sun 3/14:15 pm
MNL
-
BKI
Nonstop2h 15m
Philippines AirAsia
Wed 3/116:55 pm
BKI
-
MNL
Nonstop2h 00m
Philippines AirAsia
Deal found 2/21₱8,452
Sat 4/257:50 pm
MNL
-
BWN
Nonstop2h 20m
Cebu Pacific
Thu 4/3011:05 pm
BWN
-
MNL
Nonstop2h 25m
Cebu Pacific
Deal found 2/22₱8,568
Mon 4/611:10 pm
MNL
-
TWU
1 stop13h 55m
Multiple Airlines
Mon 4/135:40 pm
TWU
-
MNL
1 stop10h 15m
Multiple Airlines
Deal found 2/20₱8,626
Sun 3/14:15 pm
MNL
-
BKI
Nonstop2h 15m
Philippines AirAsia
Sun 3/86:55 pm
BKI
-
MNL
Nonstop2h 00m
Philippines AirAsia
Deal found 2/21₱8,857
Sun 4/511:10 pm
MNL
-
BKI
Nonstop2h 10m
Multiple Airlines
Sun 4/126:45 am
BKI
-
MNL
2 stops39h 25m
Multiple Airlines
Deal found 2/19₱9,725
Mon 4/611:10 pm
MNL
-
BKI
Nonstop2h 10m
Multiple Airlines
Mon 4/137:05 am
BKI
-
MNL
1 stop15h 05m
Multiple Airlines
Deal found 2/21₱9,899
Fri 4/1011:10 pm
MNL
-
BKI
Nonstop2h 10m
Multiple Airlines
Mon 4/1311:20 pm
BKI
-
MNL
1 stop12h 55m
Multiple Airlines
Deal found 2/19₱10,073
Sun 4/511:10 pm
MNL
-
KCH
1 stop10h 00m
Multiple Airlines
Sun 4/122:35 pm
KCH
-
MNL
1 stop13h 20m
Multiple Airlines
Deal found 2/18₱10,304

Find flight deals from Manila to Borneo

Keep the following information in mind while searching for Manila to Borneo flight deals. Data was last updated February 22, 2026.

Round-trip from

₱5,905

One-way from

₱2,721

Popular in

February

Cheapest in

July

Average price

₱8,452
Philippines AirAsia
  • Philippines AirAsia
  • 4/6-4/12
  • Nonstop
  • 4h 20m total
  • Manila to Borneo
Search Deals
Philippines AirAsia
  • Philippines AirAsia
  • 6/21
  • Nonstop
  • 2h 10m total
  • Manila to Borneo
Search Deals
Highest demand for flights based on searches. 14% potential increase in price (₱61,071 potential increase over avg. RT price).
Search Deals
Cheapest flight prices on average. 2% potential price decrease (₱10,597 potential savings vs. average RT price).
Search Deals
Average for round-trip flights in February 2026
Search Deals

Cheapflights Fare Finder

 
Customize your flight search to find flights from Manila to Borneo that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated February 22, 2026.
Use the filters below to find and compare flights from Manila to Borneo that are best for you.

Fly from

Manila

Fly to

Borneo

Route

Depart

Return

Price

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Fri 4/10

11:10 pm-1:20 am

Nonstop2h 10m

Kota Kinabalu

Sun 4/12

1:45 am-3:55 am

Nonstop2h 10m

₱5,963

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Mon 4/6

11:10 pm-1:20 am

Nonstop2h 10m

Kota Kinabalu

Sun 4/12

1:45 am-3:55 am

Nonstop2h 10m

₱6,021

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Mon 8/10

11:10 pm-1:20 am

Nonstop2h 10m

Kota Kinabalu

Wed 8/12

1:45 am-3:55 am

Nonstop2h 10m

₱6,021

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Fri 3/27

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Sun 3/29

1:45 am-3:55 am

Nonstop2h 10m

₱7,584

ManilaTawau

MNL - TWU

MNLTWU

Manila Ninoy Aquino Intl

Mon 4/6

11:10 pm-1:05 pm

1 stop13h 55m

Tawau

Mon 4/13

5:40 pm-3:55 am

1 stop10h 15m

₱8,626

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Sun 4/5

11:10 pm-1:20 am

Nonstop2h 10m

Kota Kinabalu

Sun 4/12

6:45 am-10:10 pm

2 stops39h 25m

₱9,725

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Wed 4/8

11:10 pm-1:20 am

Nonstop2h 10m

Kota Kinabalu

Wed 4/15

6:00 am-10:10 pm

2 stops16h 10m

₱9,725

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Wed 5/20

11:10 pm-1:20 am

Nonstop2h 10m

Kota Kinabalu

Sun 5/24

1:45 am-3:55 am

Nonstop2h 10m

₱9,725

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Fri 4/10

11:10 pm-1:20 am

Nonstop2h 10m

Kota Kinabalu

Mon 4/13

11:20 pm-12:15 pm

1 stop12h 55m

₱10,073

ManilaKuching

MNL - KCH

MNLKCH

Manila Ninoy Aquino Intl

Sun 4/5

11:10 pm-9:10 am

1 stop10h 00m

Kuching

Sun 4/12

2:35 pm-3:55 am

1 stop13h 20m

₱10,304

Flights are sorted by cheapest round-trip flights first.

Deals found on 2/19

Showing 1-10 of 49 results
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5

Best time to book a flight from Manila to Borneo

Have a flexible travel schedule? Discover the best time to fly to Borneo from Manila with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Manila to Borneo

What is the cheapest month to book a flight from Manila to Borneo?

Currently, September is the cheapest month in which you can book a flight from Manila to Borneo (average of ₱3,879). Flying from Manila to Borneo in December is currently the most expensive (average of ₱6,252). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from MNL to KVK?

Find hourly flight availability from Manila to Borneo. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated February 22, 2026.

When flying from Manila to Borneo, the time of day you decide to fly out makes little to no difference towards the overall price you’ll pay on tickets.

Reviews of airlines servicing Borneo

Get insights into the airlines that provide service to Borneo. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Borneo. Reviews last updated February 22, 2026.
Read reviews from past customers who have flown Malaysia Airlines, Cebu Pacific, and Philippines AirAsia from Manila to Borneo. You can also see how each airline compares in terms of entertainment options, comfort, food, crew/service, and boarding process.
Malaysia Airlines
7.3
Good
293 reviews
Check prices

Boarding

7.5

Crew

8.1

Food

7.0

Entertainment

6.7

Comfort

7.4

Overall

7.3

Reviews

1 / 20
6.0
Good

Sandeep,Dec 2025

SYD - KUL

Food was really good. My entertainment screen wasn’t working and the crew couldn’t help despite repeated restarts. I would have appreciated a voucher to use for next time or inflight shopping.
Malaysia Airlines
7.3
Good
293 reviews
Malaysia Airlines
7.3
Good
293 reviews
Check prices

Boarding

7.5

Crew

8.1

Food

7.0

Entertainment

6.7

Comfort

7.4

Overall

7.3

Reviews

1 / 20
6.0
Good

Sandeep,Dec 2025

SYD - KUL

Food was really good. My entertainment screen wasn’t working and the crew couldn’t help despite repeated restarts. I would have appreciated a voucher to use for next time or inflight shopping.
Cebu Pacific
6.8
Okay
209 reviews
Malaysia Airlines
7.3
Good
293 reviews
Check prices

Boarding

7.5

Crew

8.1

Food

7.0

Entertainment

6.7

Comfort

7.4

Overall

7.3

Reviews

1 / 20
6.0
Good

Sandeep,Dec 2025

SYD - KUL

Food was really good. My entertainment screen wasn’t working and the crew couldn’t help despite repeated restarts. I would have appreciated a voucher to use for next time or inflight shopping.
Philippines AirAsia
6.7
Okay
123 reviews
Malaysia Airlines
7.3
Good
293 reviews
Check prices

Boarding

7.5

Crew

8.1

Food

7.0

Entertainment

6.7

Comfort

7.4

Overall

7.3

Reviews

1 / 20
6.0
Good

Sandeep,Dec 2025

SYD - KUL

Food was really good. My entertainment screen wasn’t working and the crew couldn’t help despite repeated restarts. I would have appreciated a voucher to use for next time or inflight shopping.
Scoot
6.7
Okay
319 reviews
Malaysia Airlines
7.3
Good
293 reviews
Check prices

Boarding

7.5

Crew

8.1

Food

7.0

Entertainment

6.7

Comfort

7.4

Overall

7.3

Reviews

1 / 20
6.0
Good

Sandeep,Dec 2025

SYD - KUL

Food was really good. My entertainment screen wasn’t working and the crew couldn’t help despite repeated restarts. I would have appreciated a voucher to use for next time or inflight shopping.

Related info for your journey

Find useful and relevant information for your journey from Manila to Borneo. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly from for flights from Manila to Borneo?

    Manila Ninoy Aquino Intl (MNL), located 10.9 km from the city center, is the airport you fly out of when you book flights from Manila to Borneo.

  • How popular is this Manila to Borneo flight route?

    Flights from Manila Ninoy Aquino Intl to Borneo have been viewed 1,086 times in the past calendar month.

  • How long is the flight from Manila to Borneo?

    For as low as ₱15,688, Philippines AirAsia can have you in Borneo from Manila in 2h 05m. The distance between Manila and Borneo is about 1254 km. Most flights are nonstop.

  • What are the cheapest airlines to fly from Manila to Borneo one-way?

    ₱2,266 is the cheapest one-way deal found within the past few days, from Philippines AirAsia. You may also be able to find cheap deals on Cebu Pacific and Royal Brunei Airlines, with prices starting from ₱2,751 and ₱6,114, respectively.

  • What are the most popular routes from Manila to Borneo?

    The most popular route from Manila to Borneo is Manila Ninoy Aquino Intl - Kota Kinabalu. You may also consider Manila Ninoy Aquino Intl - Bandar Seri Begawan Brunei Intl or Manila Ninoy Aquino Intl - Balikpapan Sepinnggan.

  • What are the cheapest flights from Manila to Borneo?

    Looking at all options, your cheapest flight can be booked for ₱2,925. While the most popular route (Manila Ninoy Aquino Intl - Kota Kinabalu) can be booked for ₱8,973 on average, our data indicates ₱5,018 when flying from Manila to Borneo.

  • Can I find deals for flights from Manila to Borneo that include hotel bookings?

    Yes. In addition to deals on Manila to Borneo flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Manila to Borneo?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Manila to Borneo.

  • Can I find deals for business class flights from Manila to Borneo?

    Yes. Cheapflights offers flight deals from Manila to Borneo by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Manila to Borneo?

    Currently, September is the cheapest month in which you can book a flight from Manila to Borneo (average of ₱3,879). Flying from Manila to Borneo in December is currently the most expensive (average of ₱6,252). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

Toggle through the tabs below to find thousands of options on Cheapflights for your next trip.

Top 6 airlines flying from Manila to Borneo

Discover the top 6 airlines that operate flights from Manila to Borneo. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated February 22, 2026.
AirlineCheapestAverageFlexibilityOn-time
Philippines AirAsiaCheapest₱4,307Average₱6,048FlexibilityNo cancel feeOn-time53%
Search Philippines AirAsia flights
Malaysia AirlinesCheapest₱4,918Average₱18,888FlexibilityNo cancel feeOn-time67%
Search Malaysia Airlines flights
Cebu PacificCheapest₱5,589Average₱8,811FlexibilityNo cancel feeOn-time64%
Search Cebu Pacific flights
ScootCheapest₱7,984Average₱9,116FlexibilityNo cancel feeOn-timeN/A
Search Scoot flights
Royal Brunei AirlinesCheapest₱9,872Average₱15,558FlexibilityNo cancel feeOn-time84%
Search Royal Brunei Airlines flights
AirAsiaCheapest₱9,963Average₱14,593FlexibilityNo cancel feeOn-time66%
Search AirAsia flights

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Can Cheapflights find flights from Manila to Borneo with no change fees?

Yes, we can. To see specific flights from Manila to Borneo with no change fees, users can toggle flexible booking options after using the search form above to find flights.

Can Cheapflights notify me if prices for flights from Manila to Borneo become cheaper?

Yes! Start tracking prices for Manila to Borneo flights today and get alerted whenever prices for these flights change. To access this feature, click the bell icon next to the flight deals above, which will prompt you for a valid email address to receive your alerts.

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