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Cheap flights from Manila to Borneo from ₱2,726

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 3/2. Fares are subject to change and may not be available on all flights or dates of travel.
MNL — BKI
Feb 7 — Feb 141
1 adult
1 adult, Economy, 0 bags

Cheap flight deals from Manila to Borneo

Keep the following information in mind while searching for Manila to Borneo flight deals. Data was last updated January 8, 2026.

Round-trip from

₱5,985

One-way from

₱2,726

Popular in

February

Cheapest in

July

Average price

₱8,593
Philippines AirAsia
  • Philippines AirAsia
  • 4/3-4/10
  • Nonstop
  • 4h 20m total
  • Manila to Borneo
Search Deals
Philippines AirAsia
  • Philippines AirAsia
  • 3/2
  • Nonstop
  • 2h 15m total
  • Manila to Borneo
Search Deals
Highest demand for flights based on searches. 17% potential increase in price (₱83,940 potential increase over avg. RT price).
Search Deals
Cheapest flight prices on average. 2% potential price decrease (₱10,227 potential savings vs. average RT price).
Search Deals
Average for round-trip flights in January 2026
Search Deals

Find flight deals from Manila to Borneo

Enter your travel dates to find the best prices.

Cheapest flights from Manila to Borneo
Explore the most affordable flight options available from Manila to Borneo. Find the lowest fares from popular airlines and budget airlines, with prices last updated on January 8, 2026.

Thu 2/128:00 pmMNL - BWN
Nonstop2h 20mCebu Pacific
Tue 2/1711:05 pmBWN - MNL
Nonstop2h 25mCebu Pacific
Deal found 1/6₱5,985
Wed 1/284:15 pmMNL - BKI
Nonstop2h 15mPhilippines AirAsia
Wed 2/116:55 pmBKI - MNL
Nonstop2h 00mPhilippines AirAsia
Deal found 1/7₱6,045
Wed 1/214:15 pmMNL - BKI
Nonstop2h 15mPhilippines AirAsia
Sun 1/256:55 pmBKI - MNL
Nonstop2h 00mPhilippines AirAsia
Deal found 1/6₱6,222
Wed 4/1511:10 pmMNL - BKI
Nonstop2h 10mPhilippines AirAsia
Wed 4/221:45 amBKI - MNL
Nonstop2h 10mPhilippines AirAsia
Deal found 1/6₱6,282
Thu 2/58:00 pmMNL - BWN
Nonstop2h 20mCebu Pacific
Thu 2/1211:05 pmBWN - MNL
Nonstop2h 25mCebu Pacific
Deal found 1/6₱6,282
Sat 2/218:00 pmMNL - BWN
Nonstop2h 20mCebu Pacific
Sat 2/2811:05 pmBWN - MNL
Nonstop2h 25mCebu Pacific
Deal found 1/7₱6,400
Wed 1/214:15 pmMNL - BKI
Nonstop2h 15mPhilippines AirAsia
Fri 1/306:55 pmBKI - MNL
Nonstop2h 00mPhilippines AirAsia
Deal found 1/7₱6,815
Wed 4/156:55 amMNL - BKI
1 stop12h 35mMultiple Airlines
Wed 4/221:45 amBKI - MNL
Nonstop2h 10mMultiple Airlines
Deal found 1/6₱7,882
Sat 2/148:00 pmMNL - BWN
Nonstop2h 20mCebu Pacific
Tue 2/1711:05 pmBWN - MNL
Nonstop2h 25mCebu Pacific
Deal found 1/6₱8,949
Thu 1/297:30 pmMNL - BKI
1 stop23h 30mMultiple Airlines
Sun 2/16:55 pmBKI - MNL
Nonstop2h 00mMultiple Airlines
Deal found 1/7₱9,008
Thu 2/51:10 amMNL - BKI
2 stops12h 45mMultiple Airlines
Sun 2/86:55 pmBKI - MNL
Nonstop2h 00mMultiple Airlines
Deal found 1/6₱9,897
Sat 2/77:30 pmMNL - BKI
1 stop23h 30mMultiple Airlines
Mon 2/166:55 pmBKI - MNL
Nonstop2h 00mMultiple Airlines
Deal found 1/6₱9,956

Cheapflights Fare Finder

 
Customize your flight search to find flights from Manila to Borneo that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated January 8, 2026.
Use the filters below to find and compare flights from Manila to Borneo that are best for you.

Fly from

Manila

Fly to

Borneo

Route

Depart

Return

Price

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Fri 4/3

11:10 pm-1:20 am

Nonstop2h 10m

Kota Kinabalu

Fri 4/10

1:45 am-3:55 am

Nonstop2h 10m

₱5,985

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Wed 1/28

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Wed 2/11

6:55 pm-8:55 pm

Nonstop2h 00m

₱6,045

ManilaBandar Seri Begawan

MNL - BWN

MNLBWN

Manila Ninoy Aquino Intl

Thu 2/5

8:00 pm-10:20 pm

Nonstop2h 20m

Bandar Seri Begawan Brunei Intl

Thu 2/12

11:05 pm-1:30 am

Nonstop2h 25m

₱6,282

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Sun 2/22

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Sun 3/1

6:55 pm-8:55 pm

Nonstop2h 00m

₱6,282

ManilaBandar Seri Begawan

MNL - BWN

MNLBWN

Manila Ninoy Aquino Intl

Sat 2/21

8:00 pm-10:20 pm

Nonstop2h 20m

Bandar Seri Begawan Brunei Intl

Sat 2/28

11:05 pm-1:30 am

Nonstop2h 25m

₱6,400

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Wed 1/21

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Fri 1/30

6:55 pm-8:55 pm

Nonstop2h 00m

₱6,815

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Wed 4/15

6:55 am-7:30 pm

1 stop12h 35m

Kota Kinabalu

Wed 4/22

1:45 am-3:55 am

Nonstop2h 10m

₱7,882

ManilaBandar Seri Begawan

MNL - BWN

MNLBWN

Manila Ninoy Aquino Intl

Sat 2/14

8:00 pm-10:20 pm

Nonstop2h 20m

Bandar Seri Begawan Brunei Intl

Tue 2/17

11:05 pm-1:30 am

Nonstop2h 25m

₱8,949

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Sun 2/22

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

Sat 2/28

8:00 pm-5:30 am

1 stop9h 30m

₱9,956

ManilaKuching

MNL - KCH

MNLKCH

Manila Ninoy Aquino Intl

Thu 3/12

6:30 am-9:25 pm

1 stop14h 55m

Kuching

Sun 3/15

10:25 pm-5:30 am

1 stop7h 05m

₱10,489

Flights are sorted by cheapest round-trip flights first.

Deals found on 1/7

Showing 1-10 of 46 results
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Best time to book a flight from Manila to Borneo

Have a flexible travel schedule? Discover the best time to fly to Borneo from Manila with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Manila to Borneo

What is the cheapest month to book a flight from Manila to Borneo?

Currently, September is the cheapest month in which you can book a flight from Manila to Borneo (average of ₱4,089). Flying from Manila to Borneo in December is currently the most expensive (average of ₱6,400). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from MNL to KVK?

Find hourly flight availability from Manila to Borneo. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated January 8, 2026.

When flying from Manila to Borneo, the time of day you decide to fly out makes little to no difference towards the overall price you’ll pay on tickets.

Reviews of airlines servicing Borneo

Get insights into the airlines that provide service to Borneo. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Borneo. Reviews last updated January 8, 2026.
Read reviews from past customers who have flown Malaysia Airlines, Cebu Pacific, and Scoot from Manila to Borneo. You can also see how each airline compares in terms of entertainment options, comfort, food, crew/service, and boarding process.
Malaysia Airlines
7.3
Good
289 reviews
Check prices

Crew

8.1

Overall

7.3

Comfort

7.5

Boarding

7.6

Entertainment

6.7

Food

7.0

Reviews

1 / 20
6.0
Good

Sandeep,Dec 2025

SYD - KUL

Food was really good. My entertainment screen wasn’t working and the crew couldn’t help despite repeated restarts. I would have appreciated a voucher to use for next time or inflight shopping.
Malaysia Airlines
7.3
Good
289 reviews
Malaysia Airlines
7.3
Good
289 reviews
Check prices

Crew

8.1

Overall

7.3

Comfort

7.5

Boarding

7.6

Entertainment

6.7

Food

7.0

Reviews

1 / 20
6.0
Good

Sandeep,Dec 2025

SYD - KUL

Food was really good. My entertainment screen wasn’t working and the crew couldn’t help despite repeated restarts. I would have appreciated a voucher to use for next time or inflight shopping.
Cebu Pacific
6.8
Okay
205 reviews
Malaysia Airlines
7.3
Good
289 reviews
Check prices

Crew

8.1

Overall

7.3

Comfort

7.5

Boarding

7.6

Entertainment

6.7

Food

7.0

Reviews

1 / 20
6.0
Good

Sandeep,Dec 2025

SYD - KUL

Food was really good. My entertainment screen wasn’t working and the crew couldn’t help despite repeated restarts. I would have appreciated a voucher to use for next time or inflight shopping.
Scoot
6.7
Okay
313 reviews
Malaysia Airlines
7.3
Good
289 reviews
Check prices

Crew

8.1

Overall

7.3

Comfort

7.5

Boarding

7.6

Entertainment

6.7

Food

7.0

Reviews

1 / 20
6.0
Good

Sandeep,Dec 2025

SYD - KUL

Food was really good. My entertainment screen wasn’t working and the crew couldn’t help despite repeated restarts. I would have appreciated a voucher to use for next time or inflight shopping.
Philippines AirAsia
6.6
Okay
118 reviews
Malaysia Airlines
7.3
Good
289 reviews
Check prices

Crew

8.1

Overall

7.3

Comfort

7.5

Boarding

7.6

Entertainment

6.7

Food

7.0

Reviews

1 / 20
6.0
Good

Sandeep,Dec 2025

SYD - KUL

Food was really good. My entertainment screen wasn’t working and the crew couldn’t help despite repeated restarts. I would have appreciated a voucher to use for next time or inflight shopping.

Related info for your journey

Find useful and relevant information for your journey from Manila to Borneo. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly from for flights from Manila to Borneo?

    Manila Ninoy Aquino Intl (MNL), located 10.9 km from the city center, is the airport you fly out of when you book flights from Manila to Borneo.

  • How popular is this Manila to Borneo flight route?

    Flights from Manila Ninoy Aquino Intl to Borneo have been viewed 1,145 times in the past calendar month.

  • How long is the flight from Manila to Borneo?

    For as low as ₱5,985, Philippines AirAsia can have you in Borneo from Manila in 2h 10m. The distance between Manila and Borneo is about 1096 km. When browsing for deals, the options you’ll see will be for both direct flights and flights with stops.

  • What are the cheapest airlines to fly from Manila to Borneo one-way?

    ₱2,369 is the cheapest one-way deal found within the past few days, from Philippines AirAsia. You may also be able to find cheap deals on Cebu Pacific and Royal Brunei Airlines, with prices starting from ₱2,817 and ₱6,259, respectively.

  • What are the most popular routes from Manila to Borneo?

    The most popular route from Manila to Borneo is Manila Ninoy Aquino Intl - Kota Kinabalu. You may also consider Manila Ninoy Aquino Intl - Bandar Seri Begawan Brunei Intl or Manila Ninoy Aquino Intl - Kuching.

  • What are the cheapest flights from Manila to Borneo?

    Looking at all options, your cheapest flight can be booked for ₱2,858. While the most popular route (Manila Ninoy Aquino Intl - Kota Kinabalu) can be booked for ₱5,511 on average, our data indicates ₱5,163 when flying from Manila to Borneo.

  • Can I find deals for flights from Manila to Borneo that include hotel bookings?

    Yes. In addition to deals on Manila to Borneo flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Manila to Borneo?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Manila to Borneo.

  • Can I find deals for business class flights from Manila to Borneo?

    Yes. Cheapflights offers flight deals from Manila to Borneo by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Manila to Borneo?

    Currently, September is the cheapest month in which you can book a flight from Manila to Borneo (average of ₱4,089). Flying from Manila to Borneo in December is currently the most expensive (average of ₱6,400). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

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Alternative routes for Manila to Borneo

See prices for flight routes from nearby airports that may be better suited for you.
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Top 7 airlines flying from Manila to Borneo

Discover the top 7 airlines that operate flights from Manila to Borneo. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated January 8, 2026.
AirlineCheapestAverageFlexibilityOn-time
Philippines AirAsiaCheapest₱4,427Average₱6,486FlexibilityNo cancel feeOn-time53%
Search Philippines AirAsia flights
Cebu PacificCheapest₱5,667Average₱8,116FlexibilityNo cancel feeOn-time64%
Search Cebu Pacific flights
ScootCheapest₱8,173Average₱9,312FlexibilityNo cancel feeOn-timeN/A
Search Scoot flights
Royal Brunei AirlinesCheapest₱10,180Average₱15,920FlexibilityNo cancel feeOn-time84%
Search Royal Brunei Airlines flights
AirAsiaCheapest₱10,199Average₱14,757FlexibilityNo cancel feeOn-time66%
Search AirAsia flights
Malaysia AirlinesCheapest₱17,173Average₱19,815FlexibilityNo cancel feeOn-time67%
Search Malaysia Airlines flights
Singapore AirlinesCheapest₱19,705Average₱25,090FlexibilityNo cancel feeOn-time81%
Search Singapore Airlines flights

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How does Cheapflights help users find flights from Manila to Borneo?

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Why should you use Cheapflights to find cheap flight tickets from Manila to Borneo?

By finding flights from multiple airlines and providers at completely no cost, Cheapflights helps millions of users like you annually find the best flights to Borneo from Manila.

Can Cheapflights find flights from Manila to Borneo with no change fees?

Yes, we can. To see specific flights from Manila to Borneo with no change fees, users can toggle flexible booking options after using the search form above to find flights.

Can Cheapflights notify me if prices for flights from Manila to Borneo become cheaper?

Yes! Start tracking prices for Manila to Borneo flights today and get alerted whenever prices for these flights change. To access this feature, click the bell icon next to the flight deals above, which will prompt you for a valid email address to receive your alerts.

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