What’s the cheapest layover airport for flights from Manila to San José?

San Francisco (SFO) is the most affordable 1-stop option, with an average round-trip price of ₱337,439.

Which airport typically offers the quickest layover for flights from Manila to San José?

Flights via San Francisco (SFO) offer the fastest connection on this route, with an average layover time of 6h 40m.

What’s the top layover airport for flights from Manila to San José?

San Francisco (SFO) – chosen by Cheapflights users on 71% of 1-stop itineraries from Manila to San José on Cheapflights.

What’s the fastest layover option from Manila to San José?

Flights via San Francisco (SFO) have the shortest average one-way travel time for 1-stop routes: 23h 07m.

In terms of precipitation, rainfall in San José ranges from 0.0 - 300.0 inches per month. September is typically the wettest month, when rainfall can reach 300.0 mm. February is typically the driest time to visit San José when rainfall is around 0.0 mm.

If weather is an important factor for your trip to San José, use this chart to help with planning. For those seeking warmer temperatures, April is the ideal time of year to visit, when temperatures reach an average of 21.0 C. Travelers looking to avoid the cold should look outside of January, when temperatures are typically at their lowest (around 18.0 C).

What is the cheapest time of day to fly from MNL to SJO?

When flying from Manila to San José, the time of day you decide to fly out makes little to no difference towards the overall price you’ll pay on tickets.

Can I find deals for flights from Manila to San José that include hotel bookings?

Yes. In addition to deals on Manila to San José flights, Cheapflights offers vacation packages that include both flights and hotel.

How can I find direct flights from Manila to San José?

After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Manila to San José.

Can I find deals for business class flights from Manila to San José?

Yes. Cheapflights offers flight deals from Manila to San José by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

₱45,017+ Cheap Flights from Manila to San José

Cheap flight deals from Manila to San José

Enter your travel dates to find the best prices.

Cheapest

Best

Last-minute

One-way

Cheapest flights from Manila to San José
Explore the most affordable flight options available from Manila to San José. Find the lowest fares from popular airlines and budget airlines, with prices last updated on August 21, 2026.

Thu 9/1712:40 pm -

2 stops44h 10m

Thu 9/245:45 am -

3 stops45h 50m

Deal found 8/18₱79,674

Sun 12/66:50 pm -

3 stops42h 25m

Fri 12/111:46 am -

2 stops50h 04m

Deal found 8/18₱82,203

Thu 10/16:50 pm -

2 stops38h 00m

Thu 10/85:45 am -

3 stops39h 55m

Deal found 8/17₱82,881

Wed 10/2811:25 pm -

2 stops33h 28m

Sun 11/111:28 pm -

2 stops41h 22m

Deal found 8/16₱90,466

Mon 11/911:50 am -

3 stops49h 25m

Fri 11/275:00 am -

3 stops39h 40m

Deal found 8/18₱90,774

Tue 11/1011:50 am -

3 stops37h 35m

Fri 11/275:00 am -

3 stops39h 40m

Deal found 8/18₱90,898

Thu 9/179:20 pm -

2 stops36h 17m

Thu 9/247:55 am -

2 stops45h 05m

Deal found 8/20₱94,043

Mon 9/148:00 am -

3 stops38h 45m

Mon 9/215:05 am -

3 stops40h 15m

Deal found 8/17₱94,104

Find flight deals from Manila to San José

Round-trip from	₱79,674
One-way from	₱45,017
Popular in	October
Cheapest in	September
Average price	₱182,474

9/17-9/24
5 total stops
90h 00m total
Manila to San José

Search Deals

8/27
3 total stops
31h 30m total
Manila to San José

Search Deals

Highest demand for flights based on searches. 1% potential increase in price (₱184,159 potential increase over avg. RT price).

Search Deals

Cheapest flight prices on average. 3% potential price decrease (₱285,439 potential savings vs. average RT price).

Search Deals

Average for round-trip flights in August 2026

Search Deals

Fly from

Fly to

Route

Depart

Return

Price

Cheapest round-trip

ManilaSan José

MNL Manila Ninoy Aquino Intl - SJO San José Juan Santamaria Intl

MNLSJO

Manila Ninoy Aquino Intl

Tue 11/10

11:50 am-11:25 am

3 stops37h 35m

San José Juan Santamaria Intl

Fri 11/27

5:00 am-10:40 am

3 stops39h 40m

₱90,898

ManilaSan José

MNL Manila Ninoy Aquino Intl - SJO San José Juan Santamaria Intl

MNLSJO

Manila Ninoy Aquino Intl

Mon 9/14

8:00 am-8:45 am

3 stops38h 45m

San José Juan Santamaria Intl

Mon 9/21

5:05 am-11:20 am

3 stops40h 15m

₱94,104

ManilaSan José

MNL Manila Ninoy Aquino Intl - SJO San José Juan Santamaria Intl

MNLSJO

Manila Ninoy Aquino Intl

Mon 11/9

8:00 am-1:46 pm

2 stops43h 46m

San José Juan Santamaria Intl

Thu 11/26

12:30 am-9:40 am

2 stops43h 10m

₱99,593

ManilaSan José

MNL Manila Ninoy Aquino Intl - SJO San José Juan Santamaria Intl

MNLSJO

Manila Ninoy Aquino Intl

Thu 10/1

10:15 pm-6:50 pm

1 stop34h 35m

San José Juan Santamaria Intl

Thu 10/8

7:00 am-6:00 pm

2 stops45h 00m

₱105,451

Quickest round-trip

ManilaSan José

MNL Manila Ninoy Aquino Intl - SJO San José Juan Santamaria Intl

MNLSJO

Manila Ninoy Aquino Intl

Thu 9/17

9:20 pm-7:15 am

1 stop23h 55m

San José Juan Santamaria Intl

Thu 9/24

1:25 pm-5:55 am

2 stops50h 30m

₱109,891

Cheapest one-way

Quickest one-way

ManilaSan José

MNL Manila Ninoy Aquino Intl - SJO San José Juan Santamaria Intl

MNLSJO

Manila Ninoy Aquino Intl

Thu 8/27

5:45 am-11:15 pm

3 stops31h 30m

₱45,017

ManilaSan José

MNL Manila Ninoy Aquino Intl - SJO San José Juan Santamaria Intl

MNLSJO

Manila Ninoy Aquino Intl

Tue 9/15

6:50 pm-11:15 pm

3 stops66h 25m

₱47,669

Flights are sorted by cheapest round-trip flights first.

Deals found on 8/20

Sorted by cheapest first

Best time to book a flight from Manila to San José

Have a flexible travel schedule? Discover the best time to fly to San José from Manila with our price prediction graph.

MNL-SJO

Estimated round-trip price

Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Manila to San José

Prices

Airfare is below average for this route at the moment.

Manila to San José flights typically cost between ₱128,453 and ₱150,900 in September.
The cheapest round-trip price found within the last 5 days was ₱79,674 on Multiple Airlines (Sep 17-Sep 24).

Related info for your journey

Can I find deals for flights from Manila to San José that include hotel bookings?
Yes. In addition to deals on Manila to San José flights, Cheapflights offers vacation packages that include both flights and hotel.
How can I find direct flights from Manila to San José?
After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Manila to San José.
Can I find deals for business class flights from Manila to San José?
Yes. Cheapflights offers flight deals from Manila to San José by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

Browse thousands of different options on Cheapflights for your next trip

Complete your trip

Flights by cabin class

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Complete your trip

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How does Cheapflights help users find flights from Manila to San José?

Deals for Manila to San José flights are sourced from 900+ travel sites when you use Cheapflights. When all flight results come back, Cheapflights lets you sort and filter flights using different criteria to choose better, like price, airport, cabin class, and plenty of other options.

Why should you use Cheapflights to find cheap flight tickets from Manila to San José?

Cheapflights helps you find that perfect flight to San José from Manila by searching from hundreds of airlines and agencies you know and love. We are also free to use, in case you were wondering!

Can Cheapflights find flights from Manila to San José with no change fees?

Cheapflights does show flights with no change fees to all users. To see these options for flights from Manila to San José, users can toggle the no change fees filter when performing a flight search.

Can Cheapflights notify me if prices for flights from Manila to San José become cheaper?

Yes, Cheapflights offers price alerts on Manila to San José flights so you can book your travel at the perfect time. Price Alerts can be enabled by clicking the bell icon next to the flight deals above and providing your email address where you want to receive the alerts.

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Cheap flights from Manila to San José from ₱45,017

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 8/27. Fares are subject to change and may not be available on all flights or dates of travel.

Cheap flight deals from Manila to San José

Cheapest flights from Manila to San JoséExplore the most affordable flight options available from Manila to San José. Find the lowest fares from popular airlines and budget airlines, with prices last updated on August 21, 2026.

Explore the most affordable flight options available from Manila to San José. Find the lowest fares from popular airlines and budget airlines, with prices last updated on August 21, 2026.

Best flights from Manila to San JoséDiscover carefully curated flight deals from Manila to San José that have cost, travel time, and layovers in mind to ensure you get the best travel experience. Data last updated August 21, 2026.

Discover carefully curated flight deals from Manila to San José that have cost, travel time, and layovers in mind to ensure you get the best travel experience. Data last updated August 21, 2026.

Last-minute flights from Manila to San JoséDiscover last-minute flight deals from Manila to San José. Data last updated August 21, 2026 and is based on user searches.

Discover last-minute flight deals from Manila to San José. Data last updated August 21, 2026 and is based on user searches.

One-way flights from Manila to San JoséSearch for one-way flight options from Manila to San José. Find affordable one-way fares based on user searches. Data last updated August 21, 2026.

Search for one-way flight options from Manila to San José. Find affordable one-way fares based on user searches. Data last updated August 21, 2026.

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Use the filters below to find and compare flights from Manila to San José that are best for you.

Best time to book a flight from Manila to San José

Have a flexible travel schedule? Discover the best time to fly to San José from Manila with our price prediction graph.

Cheapflights Insights

How much does it cost to fly round-trip from Manila to San José?

Airfare is below average for this route at the moment.

Manila to San José flights typically cost between ₱128,453 and ₱150,900 in September.The cheapest round-trip price found within the last 5 days was ₱79,674 on Multiple Airlines (Sep 17-Sep 24).

What’s the top layover airport for flights from Manila to San José?

San Francisco (SFO) – chosen by Cheapflights users on 71% of 1-stop itineraries from Manila to San José on Cheapflights.

What’s the cheapest layover airport for flights from Manila to San José?

San Francisco (SFO) is the most affordable 1-stop option, with an average round-trip price of ₱337,439.

What’s the fastest layover option from Manila to San José?

Flights via San Francisco (SFO) have the shortest average one-way travel time for 1-stop routes: 23h 07m.

Which airport typically offers the quickest layover for flights from Manila to San José?

Flights via San Francisco (SFO) offer the fastest connection on this route, with an average layover time of 6h 40m.

Related info for your journey

Can I find deals for flights from Manila to San José that include hotel bookings?

How can I find direct flights from Manila to San José?

Can I find deals for business class flights from Manila to San José?

Browse thousands of different options on Cheapflights for your next trip

Toggle through the tabs below to find thousands of options on Cheapflights for your next trip.

Complete your trip

Complete your trip to San José by adding a car rental and/or hotel reservation to your travel itinerary.

Search flights from Manila to San José by cabin class

Find flights from Manila to San José, based on your preferred cabin class, be it economy, premium economy, business, or first class.

Manila and San José flights

Browse other Manila and San José flight options. Last updated on August 21, 2026.

Other flights from Manila

Browse through other flights departing from Manila. Flights are based on user searches made on Cheapflights and were last updated on August 21, 2026.

Popular flight searches

Check out other popular destinations found by fellow travelers in 2026

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How does Cheapflights help users find flights from Manila to San José?

Why should you use Cheapflights to find cheap flight tickets from Manila to San José?

Can Cheapflights find flights from Manila to San José with no change fees?

Can Cheapflights notify me if prices for flights from Manila to San José become cheaper?

100% Free

Book with Flexibility

Travel Smart

Cheapest flights from Manila to San José
Explore the most affordable flight options available from Manila to San José. Find the lowest fares from popular airlines and budget airlines, with prices last updated on August 21, 2026.

Best flights from Manila to San José
Discover carefully curated flight deals from Manila to San José that have cost, travel time, and layovers in mind to ensure you get the best travel experience. Data last updated August 21, 2026.

Last-minute flights from Manila to San José
Discover last-minute flight deals from Manila to San José. Data last updated August 21, 2026 and is based on user searches.

One-way flights from Manila to San José
Search for one-way flight options from Manila to San José. Find affordable one-way fares based on user searches. Data last updated August 21, 2026.

Manila to San José flights typically cost between ₱128,453 and ₱150,900 in September.
The cheapest round-trip price found within the last 5 days was ₱79,674 on Multiple Airlines (Sep 17-Sep 24).